RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 TRAV27A0A087WT01 109 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 IGKV1D-43A0A0B4J1Z2 117 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 C5orf49A4QMS7 147 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 C17orf100A8MU93 164 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 NME4O00746 187 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 FFAR1O14842 300 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 PPIHO43447 177 aaKnown RBP17.56■□□□□ 0.4
SNHG6-203ENST00000520944 SLC9A3P48764 834 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 GDI2P50395 445 aaKnown RBP17.56■□□□□ 0.4
SNHG6-203ENST00000520944 CDH15P55291 814 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 PCBD1P61457 104 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 ERVS71-1P61550 626 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 FAM27BQ5VT28 67 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 MEX3DQ86XN8 651 aaKnown RBP17.56■□□□□ 0.4
SNHG6-203ENST00000520944 PHC2Q8IXK0 858 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 FAM162AQ96A26 154 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 HSH2DQ96JZ2 352 aa17.56■□□□□ 0.4
SNHG6-203ENST00000520944 KCTD14Q9BQ13 255 aaPredicted RBP17.56■□□□□ 0.4
SNHG6-203ENST00000520944 REPIN1Q9BWE0 567 aaKnown RBP17.56■□□□□ 0.4
SNHG6-203ENST00000520944 ZNF275Q9NSD4 429 aaPredicted RBP17.56■□□□□ 0.4
SNHG6-203ENST00000520944 B4DSR2 109 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 PCMT1P22061 227 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 FUT4P22083 530 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 GCH1P30793 250 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 RPL4P36578 427 aaKnown RBP17.55■□□□□ 0.4
SNHG6-203ENST00000520944 MAGEB1P43366 347 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 GSK3BP49841 420 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 NUDT2P50583 147 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 ERVK-25P63136 954 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 CCL8P80075 99 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 PSG4Q00888 419 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 HACD2Q6Y1H2 254 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 MBOAT2Q6ZWT7 520 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 AKR7LQ8NHP1 331 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 CMTM5Q96DZ9 223 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 C1orf159Q96HA4 380 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 TSPAN32Q96QS1 320 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 NDEL1Q9GZM8 345 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 NARFLQ9H6Q4 476 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 DECR2Q9NUI1 292 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 GRHPRQ9UBQ7 328 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 TIMM10BQ9Y5J6 103 aa17.55■□□□□ 0.4
SNHG6-203ENST00000520944 A0A087WUU8 490 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 A0A1W2PPL8 197 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 TPD52L2O43399 206 aaKnown RBP17.54■□□□□ 0.4
SNHG6-203ENST00000520944 NCR1O76036 304 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 CST2P09228 141 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 LAP3P28838 519 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 SRP14P37108 136 aaKnown RBP17.54■□□□□ 0.4
SNHG6-203ENST00000520944 TEKQ02763 1124 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 ZNF718Q3SXZ3 478 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 C8orf82Q6P1X6 216 aaPredicted RBP17.54■□□□□ 0.4
SNHG6-203ENST00000520944 TBPL2Q6SJ96 375 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 C1orf174Q8IYL3 243 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 CLDN22Q8N7P3 220 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 LRRC75AQ8NAA5 344 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 OR13C2Q8NGS9 318 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 CLDND2Q8NHS1 167 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 YIPF5Q969M3 257 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 POM121L2Q96KW2 1035 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 NKIRAS2Q9NYR9 191 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 RPS6KA6Q9UK32 745 aa17.54■□□□□ 0.4
SNHG6-203ENST00000520944 FAM32AQ9Y421 112 aaKnown RBP17.54■□□□□ 0.4
SNHG6-203ENST00000520944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.53■□□□□ 0.44e-11■■■■■ 43.3
SNHG6-203ENST00000520944 XKRYO14609 159 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 GMNNO75496 209 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 IGHV3-13P01766 116 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 DVL1P1P54792 670 aaPredicted RBP17.53■□□□□ 0.4
SNHG6-203ENST00000520944 ZBED5Q49AG3 693 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 TMPRSS11FQ6ZWK6 438 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 TREML1Q86YW5 311 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 OR2H1Q9GZK4 316 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 ANKRD19PQ9H560 264 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 NMNAT1Q9HAN9 279 aaPredicted RBP17.53■□□□□ 0.4
SNHG6-203ENST00000520944 TMEM5Q9Y2B1 443 aa17.53■□□□□ 0.4
SNHG6-203ENST00000520944 LOC100509620A0A075B734 347 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 PLSCR5A0PG75 271 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 C12orf71A8MTZ7 269 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 CDC14BO60729 498 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 TFP02787 698 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 NCK1P16333 377 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 MSR1P21757 451 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 GPR4P46093 362 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 PSME3P61289 254 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 GLO1Q04760 184 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 FHL1Q13642 323 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 SPATA46Q5T0L3 261 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 ARL9Q6T311 187 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 GLCCI1Q86VQ1 547 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 ELAC2Q9BQ52 826 aaKnown RBP17.52■□□□□ 0.4
SNHG6-203ENST00000520944 WNT5BQ9H1J7 359 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 ENPP4Q9Y6X5 453 aa17.52■□□□□ 0.4
SNHG6-203ENST00000520944 RP2O75695 350 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 PRSS23O95084 383 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 CD14P08571 375 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 WNT5AP41221 380 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 CRYBB2P43320 205 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 ZNF81P51508 661 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 ARHGDIAP52565 204 aa17.51■□□□□ 0.39
SNHG6-203ENST00000520944 LIPNQ5VXI9 398 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms