RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 NUDT6P53370 316 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 GLO1Q04760 184 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 PIGFQ07326 219 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 GABRA6Q16445 453 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 GLB1L2Q8IW92 636 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 C1QTNF6Q9BXI9 259 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 ACTR6Q9GZN1 396 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 ELOVL5Q9NYP7 299 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 H2AFY2Q9P0M6 372 aaPredicted RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 DCHS2Q6V1P9 2916 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 ENTPD6O75354 484 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 APOL3O95236 402 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 TFP02787 698 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 LSAMPQ13449 338 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 SMN1Q16637 294 aaKnown RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 C8orf59Q8N0T1 100 aaPredicted RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 DEPDC4Q8N2C3 294 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 NABP1Q96AH0 204 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 WDR76Q9H967 626 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
VPS37A-206ENST00000520140 DOPEY2Q9Y3R5 2298 aa12.47□□□□□ -0.41
VPS37A-206ENST00000520140 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 HLA-HP01893 362 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
VPS37A-206ENST00000520140 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.41
VPS37A-206ENST00000520140 SLC25A1P53007 311 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 TBRG1Q3YBR2 411 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 AADACL4Q5VUY2 407 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 RHOXF1Q8NHV9 184 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 LINC01560Q8TB33 94 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 APH1BQ8WW43 257 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 ZNF582Q96NG8 517 aaPredicted RBP12.46□□□□□ -0.41
VPS37A-206ENST00000520140 TEAD3Q99594 435 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 MRPL22Q9NWU5 206 aaKnown RBP12.46□□□□□ -0.41
VPS37A-206ENST00000520140 RTTNQ86VV8 2226 aa12.46□□□□□ -0.41
VPS37A-206ENST00000520140 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 GABRB1P18505 474 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 SLC2A5P22732 501 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 HOXC12P31275 282 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.42
VPS37A-206ENST00000520140 CDH11P55287 796 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 ISL1P61371 349 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 HSF2Q03933 536 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 MAD2L1BPQ15013 274 aaPredicted RBP12.46□□□□□ -0.42
VPS37A-206ENST00000520140 FBXL19-AS1Q494R0 122 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 LINC01590Q5TEZ4 76 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 NXNL2Q5VZ03 156 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 CORO6Q6QEF8 472 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 SLC26A10Q8NG04 563 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 TRUB1Q8WWH5 349 aaKnown RBP12.46□□□□□ -0.42
VPS37A-206ENST00000520140 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.42
VPS37A-206ENST00000520140 LRRC46Q96FV0 321 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 ZNF416Q9BWM5 594 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 POLE4Q9NR33 117 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 PCDHGB5Q9Y5G0 923 aa12.46□□□□□ -0.42
VPS37A-206ENST00000520140 USP9YO00507 2555 aaPredicted RBP12.45□□□□□ -0.42
VPS37A-206ENST00000520140 GLCEO94923 617 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 OR8G3PP0DMU2 310 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 GAAP10253 952 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 CD79AP11912 226 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 FMO3P31513 532 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 HSPA13P48723 471 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 SNRPGP62308 76 aaKnown RBP12.45□□□□□ -0.42
VPS37A-206ENST00000520140 ADAM8P78325 824 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 MRPS34P82930 218 aaKnown RBP12.45□□□□□ -0.42
VPS37A-206ENST00000520140 TEKQ02763 1124 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 OR7E24Q6IFN5 339 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 USP51Q70EK9 711 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 SHFQ7M4L6 423 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 SLC16A14Q7RTX9 510 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 ERI1Q8IV48 349 aaKnown RBP12.45□□□□□ -0.42
VPS37A-206ENST00000520140 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 SETD9Q8NE22 299 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 MED18Q9BUE0 208 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 SIAEQ9HAT2 523 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 POLR1DQ9Y2S0 133 aa12.45□□□□□ -0.42
VPS37A-206ENST00000520140 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
VPS37A-206ENST00000520140 CCDC182A6NF36 153 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 PRODHO43272 600 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 SELENOFO60613 162 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 WBP4O75554 376 aaKnown RBP12.44□□□□□ -0.42
VPS37A-206ENST00000520140 FARS2O95363 451 aaKnown RBP12.44□□□□□ -0.42
VPS37A-206ENST00000520140 PSKH1P11801 424 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 MSR1P21757 451 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 HCCSP53701 268 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 TAB1Q15750 504 aa12.44□□□□□ -0.42
VPS37A-206ENST00000520140 MEPCEQ7L2J0 689 aaKnown RBP12.44□□□□□ -0.42
VPS37A-206ENST00000520140 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms