RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SLC2A4RGQ9NR83 387 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SIGLEC7Q9Y286 467 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 EP400Q96L91 3159 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 TRAV8-7A0A075B6U6 113 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 DLEU1O43261 78 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 TMPRSS11DO60235 418 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 MAS1P04201 325 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 DPEP1P16444 411 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 RAB6AP20340 208 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 IL13RA1P78552 427 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 COL9A2Q14055 689 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 HYAL4Q2M3T9 481 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 OR4C6Q8NH72 309 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 CASTOR1Q8WTX7 329 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 MRGPRFQ96AM1 343 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 PACRGQ96M98 296 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 CASD1Q96PB1 797 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 AQP10Q96PS8 301 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 SGPP1Q9BX95 441 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 NMES1Q9C002 83 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 KLHL28Q9NXS3 571 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 FBXL21Q9UKT6 434 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 TRAV27A0A087WT01 109 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 PSMD9O00233 223 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 SRPX2O60687 465 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 SOCS5O75159 536 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 SNAI1O95863 264 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 CRYABP02511 175 aaKnown RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 NPSP0C0P6 89 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 SNCAP37840 140 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 EIF5AP63241 154 aaKnown RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 Q499Y3 187 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 EXOSC6Q5RKV6 272 aaKnown RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 TAF8Q7Z7C8 310 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 ROBO4Q8WZ75 1007 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 BSCL2Q96G97 398 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-208ENST00000519004 EPHX3Q9H6B9 360 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 TAF9BQ9HBM6 251 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 AHSPQ9NZD4 102 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 OR5AC2Q9NZP5 309 aa12.28□□□□□ -0.44
PABPC1-208ENST00000519004 TMEM235A6NFC5 223 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 PRR32B1ATL7 298 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 C9J4A7 227 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 M0QZ92 97 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 P2RX6O15547 441 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 TSPAN6O43657 245 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 IL18BPO95998 194 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 CXCL1P09341 107 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 QDPRP09417 244 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 LYL1P12980 280 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 ZNF28P17035 718 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 FGF7P21781 194 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 VGLL4Q14135 290 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 GUK1Q16774 197 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 ARHGAP40Q5TG30 622 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 EIF5AL1Q6IS14 154 aaKnown RBP12.27□□□□□ -0.44
PABPC1-208ENST00000519004 LANCL3Q6ZV70 420 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 M1APQ8TC57 530 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 CXorf40AQ8TE69 158 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 TMEM159Q96B96 161 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 RBM18Q96H35 190 aaKnown RBP12.27□□□□□ -0.44
PABPC1-208ENST00000519004 CDC6Q99741 560 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 CUTCQ9NTM9 273 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 CALML5Q9NZT1 146 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 FARSAQ9Y285 508 aaKnown RBP12.27□□□□□ -0.44
PABPC1-208ENST00000519004 TMED7Q9Y3B3 224 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 OR51B4Q9Y5P0 310 aa12.27□□□□□ -0.44
PABPC1-208ENST00000519004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-208ENST00000519004 GJB5O95377 273 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 GPANK1O95872 356 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 HTR2CP28335 458 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 DHPSP49366 369 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-208ENST00000519004 NCBP2P52298 156 aaKnown RBP eCLIP12.27□□□□□ -0.45
PABPC1-208ENST00000519004 PDX1P52945 283 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-208ENST00000519004 TGM3Q08188 693 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 ELOCQ15369 112 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 UBE2V2Q15819 145 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 C14orf28Q4W4Y0 310 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 KHDRBS2Q5VWX1 349 aaKnown RBP12.27□□□□□ -0.45
PABPC1-208ENST00000519004 ZNF529Q6P280 563 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 TMEM150AQ86TG1 271 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 ZNF764Q96H86 408 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-208ENST00000519004 OR7D2Q96RA2 312 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 OR14J1Q9UGF5 321 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 MSRAQ9UJ68 235 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 HS3ST3B1Q9Y662 390 aa12.27□□□□□ -0.45
PABPC1-208ENST00000519004 VNN2O95498 520 aa12.26□□□□□ -0.45
PABPC1-208ENST00000519004 CSN2P05814 226 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms