RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 JSRP1Q96MG2 331 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-207ENST00000518569 AMDHD1Q96NU7 426 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TAAR1Q96RJ0 339 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 COPS8Q99627 209 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 NAT9Q9BTE0 207 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 DCUN1D5Q9BTE7 237 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 TEKT3Q9BXF9 490 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SRRQ9GZT4 340 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 SLC38A1Q9H2H9 487 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ELOVL3Q9HB03 270 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 ZC4H2Q9NQZ6 224 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 C19orf12Q9NSK7 152 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 UFSP2Q9NUQ7 469 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PIPOXQ9P0Z9 390 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 PISDQ9UG56 409 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 CLEC2DQ9UHP7 191 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 B9D1Q9UPM9 204 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 USP16Q9Y5T5 823 aa2.59□□□□□ -1.99
VPS13B-207ENST00000518569 INSRP06213 1382 aa2.59□□□□□ -2
VPS13B-207ENST00000518569 LRRIQ1Q96JM4 1722 aa2.59□□□□□ -2
VPS13B-207ENST00000518569 SCAPERQ9BY12 1400 aa2.59□□□□□ -2
VPS13B-207ENST00000518569 ARHGAP5Q13017 1502 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 REREQ9P2R6 1566 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 LRP6O75581 1613 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 COL16A1Q07092 1604 aaPredicted RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 CENPXA8MT69 81 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 RNASEK-C17orf49H0YIS7 233 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 M0R036 132 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 RAB29O14966 203 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 RS1O15537 224 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 OR1F1O43749 312 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 HSBP1O75506 76 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 LYPLA1O75608 230 aaPredicted RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 TM7SF2O76062 418 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 SNAPINO95295 136 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CST4P01036 141 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 APOEP02649 317 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 SEMG1P04279 462 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 FABP1P07148 127 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 HBQ1P09105 142 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 PET100P0DJ07 73 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 AZU1P20160 251 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 PRPS1L1P21108 318 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 UQCRC2P22695 453 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 TUBG1P23258 451 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 HNRNPH3P31942 346 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 KIR3DL2P43630 455 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CDK9P50750 372 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 ACLYP53396 1101 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 DIO3P55073 304 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 RIPK4P57078 832 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 ATP6V0D1P61421 351 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 NTHL1P78549 312 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 MRPS11P82912 194 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 OGDHQ02218 1023 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 TSPAN31Q12999 210 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 SYPL1Q16563 259 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 ALKBH6Q3KRA9 238 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CCDC58Q4VC31 144 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 C5orf47Q569G3 176 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 YIF1BQ5BJH7 314 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 KHDRBS2Q5VWX1 349 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 OR2A2Q6IF42 318 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 SLC8B1Q6J4K2 584 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 ZNF530Q6P9A1 599 aaPredicted RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 TMEM220Q6QAJ8 160 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CLEC18BQ6UXF7 455 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 H2BFWTQ7Z2G1 175 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 MRPL21Q7Z2W9 205 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 TAC4Q86UU9 113 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 C17orf82Q86X59 251 aaPredicted RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 ENTHD1Q8IYW4 607 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 ABCA7Q8IZY2 2146 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CEND1Q8N111 149 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 Q8N7P7 452 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 OR4A15Q8NGL6 344 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 PIH1D2Q8WWB5 315 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 PIGCQ92535 297 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 MYLPFQ96A32 169 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 FGGYQ96C11 551 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 TGM7Q96PF1 710 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CYP2S1Q96SQ9 504 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CIB1Q99828 191 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 POTEKPQ9BYX7 375 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 SLC22A4Q9H015 551 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 PPDPFQ9H3Y8 114 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 NXF3Q9H4D5 531 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 TUBG2Q9NRH3 451 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 ADA2Q9NZK5 511 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 SLC17A7Q9P2U7 560 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 C3orf18Q9UK00 162 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 AP3M1Q9Y2T2 418 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 FADS3Q9Y5Q0 445 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 URGCP-MRPS24S4R325 110 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 CDC42BPAQ5VT25 1732 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 MROH7-TTC4A0A0A0MT08 1334 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 USP42Q9H9J4 1324 aaKnown RBP2.58□□□□□ -2
VPS13B-207ENST00000518569 PNPLA6Q8IY17 1366 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 MAP3K5Q99683 1374 aa2.58□□□□□ -2
VPS13B-207ENST00000518569 AGLP35573 1532 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms