RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LNX2Q8N448 690 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 NUP37Q8NFH4 326 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 OR52E2Q8NGJ4 325 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 FBXO17Q96EF6 278 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 GRIP2Q9C0E4 1043 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 CXorf56Q9H5V9 222 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 RERGLQ9H628 205 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF556Q9HAH1 456 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 REV1Q9UBZ9 1251 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 ROS1P08922 2347 aa19.06■□□□□ 0.64
VEGFA-217ENST00000518538 PTHP01270 115 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF35P13682 527 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 PRKACGP22612 351 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 ACTR3P61158 418 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 HGFACQ04756 655 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 PLP2Q04941 152 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.05■□□□□ 0.64
VEGFA-217ENST00000518538 SLC36A3Q495N2 470 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 AGAP6Q5VW22 663 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 GLB1L2Q8IW92 636 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 LRRC75A-AS1Q8N1F1 130 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 SDR9C7Q8NEX9 313 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 OR2T33Q8NG76 320 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 TEX47Q8TBZ9 253 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 WACQ9BTA9 647 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 BDH2Q9BUT1 245 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 TRAF4Q9BUZ4 470 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-217ENST00000518538 C1orf198Q9H425 327 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 CA10Q9NS85 328 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 COA3Q9Y2R0 106 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-217ENST00000518538 DSCAMO60469 2012 aa19.05■□□□□ 0.64
VEGFA-217ENST00000518538 SCG5P05408 212 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF32P17041 273 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 APOBEC3AP31941 199 aaPredicted RBP19.04■□□□□ 0.64
VEGFA-217ENST00000518538 PCBD1P61457 104 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 HSF2Q03933 536 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 ENDOGQ14249 297 aaKnown RBP19.04■□□□□ 0.64
VEGFA-217ENST00000518538 KPNB1Q14974 876 aaKnown RBP19.04■□□□□ 0.64
VEGFA-217ENST00000518538 YTHDF3Q7Z739 585 aaKnown RBP19.04■□□□□ 0.64
VEGFA-217ENST00000518538 MUC15Q8N387 334 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 ATG16L2Q8NAA4 619 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 NPEPL1Q8NDH3 523 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 SLC30A7Q8NEW0 376 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 OR4Q3Q8NH05 313 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 OR5K1Q8NHB7 308 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 FOXN4Q96NZ1 517 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 TSSK2Q96PF2 358 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF416Q9BWM5 594 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 RACGAP1Q9H0H5 632 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 RPRD1BQ9NQG5 326 aaKnown RBP19.04■□□□□ 0.64
VEGFA-217ENST00000518538 CBLN4Q9NTU7 201 aa19.04■□□□□ 0.64
VEGFA-217ENST00000518538 IGLV1-36A0A0B4J1U3 117 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 IQCMA0A1B0GVH7 501 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 OR6C68A6NDL8 312 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 C12orf71A8MTZ7 269 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 H3BN98 237 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 OVOL3O00110 214 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 DCTN6O00399 190 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 CD8AP01732 235 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 PAX1P15863 534 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 PABPC1L2AQ5JQF8 200 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 SYT9Q86SS6 491 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 ZBTB46Q86UZ6 589 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 OR6V1Q8N148 313 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 DNAJC9Q8WXX5 260 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 RAB3IPQ96QF0 476 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-217ENST00000518538 GSX2Q9BZM3 304 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF442Q9H7R0 627 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 EMC7Q9NPA0 242 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF701Q9NV72 531 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-217ENST00000518538 B9D1Q9UPM9 204 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 TIMM10BQ9Y5J6 103 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 FKBP7Q9Y680 259 aa19.03■□□□□ 0.64
VEGFA-217ENST00000518538 HEATR1Q9H583 2144 aaKnown RBP19.03■□□□□ 0.64
VEGFA-217ENST00000518538 OSMP13725 252 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 NR4A1P22736 598 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 LSM6P62312 80 aaKnown RBP19.02■□□□□ 0.64
VEGFA-217ENST00000518538 NKX6-1P78426 367 aaPredicted RBP19.02■□□□□ 0.64
VEGFA-217ENST00000518538 PSG4Q00888 419 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 DAG1Q14118 895 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 TBC1D28Q2M2D7 210 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 ZNF362Q5T0B9 420 aaPredicted RBP19.02■□□□□ 0.64
VEGFA-217ENST00000518538 UGT2A3Q6UWM9 527 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 HIPK1Q86Z02 1210 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 CPEB3Q8NE35 698 aaKnown RBP19.02■□□□□ 0.64
VEGFA-217ENST00000518538 OR1J2Q8NGS2 313 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 LRTOMTQ8WZ04 291 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 DDOQ99489 341 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 OR2H1Q9GZK4 316 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 FN3KQ9H479 309 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 SRA1Q9HD15 236 aaKnown RBP19.02■□□□□ 0.64
VEGFA-217ENST00000518538 KIF17Q9P2E2 1029 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 KLHL21Q9UJP4 597 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 SPEF1Q9Y4P9 236 aa19.02■□□□□ 0.64
VEGFA-217ENST00000518538 CREBBPQ92793 2442 aa19.01■□□□□ 0.63
VEGFA-217ENST00000518538 MPZL1O95297 269 aa19.01■□□□□ 0.63
VEGFA-217ENST00000518538 GAAP10253 952 aa19.01■□□□□ 0.63
VEGFA-217ENST00000518538 PTH2RP49190 550 aa19.01■□□□□ 0.63
VEGFA-217ENST00000518538 CENPAP49450 140 aa19.01■□□□□ 0.63
VEGFA-217ENST00000518538 GALK2Q01415 458 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms