RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 INSM1Q01101 510 aaPredicted RBP16.52■□□□□ 0.24
SDC2-202ENST00000518385 HLXQ14774 488 aaPredicted RBP16.52■□□□□ 0.24
SDC2-202ENST00000518385 PXDC1Q5TGL8 231 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 RPTNQ6XPR3 784 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 FAM220AQ7Z4H9 259 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 ANKRD37Q7Z713 158 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 ATG4DQ86TL0 474 aaPredicted RBP16.52■□□□□ 0.24
SDC2-202ENST00000518385 MISPQ8IVT2 679 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 DTX3Q8N9I9 347 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 OR5T2Q8NGG2 359 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 OR52E2Q8NGJ4 325 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 OR8K3Q8NH51 312 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 NUBPLQ8TB37 319 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 ORAI1Q96D31 301 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 KLHL15Q96M94 604 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 LMF1Q96S06 567 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 NMNAT2Q9BZQ4 307 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 SLC25A32Q9H2D1 315 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 SLC6A15Q9H2J7 730 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 NKIRAS2Q9NYR9 191 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 UPB1Q9UBR1 384 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 ZNF69Q9UC07 566 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 GNG8Q9UK08 70 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 GLCEO94923 617 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CCL4P13236 92 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 GABRA1P14867 456 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 FUT1P19526 365 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 AGTR1P30556 359 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CD226Q15762 336 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 STPG1Q5TH74 334 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CDCP2Q5VXM1 449 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 TMUB2Q71RG4 321 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CHMP1BQ7LBR1 199 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 SSX6Q7RTT6 188 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 PRSS45Q7RTY3 260 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CDH26Q8IXH8 852 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 PDZD9Q8IXQ8 264 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 PRSS58Q8IYP2 241 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 OR51A7Q8NH64 312 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 MS4A3Q96HJ5 214 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 ADAM19Q9H013 955 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 TCF7L1Q9HCS4 588 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 MYOZ1Q9NP98 299 aaPredicted RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 C19orf25Q9UFG5 118 aaPredicted RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 NXT1Q9UKK6 140 aaKnown RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 TRAV27A0A087WT01 109 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 B4E171 279 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 H7C417 338 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 SUSD5O60279 629 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 ICOSLGO75144 302 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 RBBP9O75884 186 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 GLSO94925 669 aaPredicted RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 RPA2P15927 270 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 ATF4P18848 351 aaPredicted RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 ABCD3P28288 659 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 TSPAN7P41732 249 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 RAD52P43351 418 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 EMP2P54851 167 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 RNF4P78317 190 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 FHL1Q13642 323 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 Q499Y3 187 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CCDC157Q569K6 752 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 RNASE12Q5GAN4 147 aaKnown RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 GLB1L2Q8IW92 636 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 PM20D2Q8IYS1 436 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 STPG2Q8N412 459 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 NFAM1Q8NET5 270 aaPredicted RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 OR13C5Q8NGS8 318 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 OR6K3Q8NGY3 331 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 ZNF417Q8TAU3 575 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 SYNPRQ8TBG9 265 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CCDC107Q8WV48 283 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 CMKLR1Q99788 373 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 MTFP1Q9UDX5 166 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 ZNF107Q9UII5 783 aaPredicted RBP16.51■□□□□ 0.23
SDC2-202ENST00000518385 CLEC4AQ9UMR7 237 aa16.51■□□□□ 0.23
SDC2-202ENST00000518385 TRBV5-5A0A0J9YX44 114 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 SULT1C2O00338 296 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 TOR1AO14656 332 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 PHYHO14832 338 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 XRCC3O43542 346 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 CDC40O60508 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
SDC2-202ENST00000518385 SCO1O75880 301 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 UBBP0CG47 229 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 UBCP0CG48 685 aaKnown RBP16.5■□□□□ 0.23
SDC2-202ENST00000518385 PGCP20142 388 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 TAS2R20P59543 309 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 RPS27AP62979 156 aaKnown RBP16.5■□□□□ 0.23
SDC2-202ENST00000518385 UBA52P62987 128 aaKnown RBP16.5■□□□□ 0.23
SDC2-202ENST00000518385 TRIP6Q15654 476 aaKnown RBP16.5■□□□□ 0.23
SDC2-202ENST00000518385 LANCL3Q6ZV70 420 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 FCRLAQ7L513 359 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 SLC36A1Q7Z2H8 476 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 BVESQ8NE79 360 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 OR5L2Q8NGL0 311 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 OR6M1Q8NGM8 313 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 OR6N1Q8NGY5 312 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 ST8SIA4Q92187 359 aa16.5■□□□□ 0.23
SDC2-202ENST00000518385 ZMYND19Q96E35 227 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms