RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LRRC2Q9BYS8 371 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 GOLPH3LQ9H4A5 285 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 B3GNT2Q9NY97 397 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 XPO7Q9UIA9 1087 aaKnown RBP-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 MMP17Q9ULZ9 603 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 ICOSQ9Y6W8 199 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 SPAG17Q6Q759 2223 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PLCH2O75038 1416 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 CEMIPQ8WUJ3 1361 aa-2.35□□□□□ -2.78
SNORA40.16-201ENST00000517238 NUP205Q92621 2012 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 TRAV19A0A0A6YYK7 116 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ARHGEF37A1IGU5 675 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ANKRD18BA2A2Z9 1011 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 IZUMO1RA6ND01 250 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 DDX39AO00148 427 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 FCN1O00602 326 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 DDX58O95786 925 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 RPSAP08865 295 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ALOX5APP20292 161 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 AHCYP23526 432 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 CMA1P23946 247 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF80P51504 273 aaPredicted RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 RAP1GDS1P52306 607 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 MFAP3P55082 362 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 CALD1Q05682 793 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ELOCQ15369 112 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 STX1AQ16623 288 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 AADACL4Q5VUY2 407 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 RTL6Q6ICC9 239 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 HACD2Q6Y1H2 254 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 EID2Q8N6I1 236 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR4D6Q8NGJ1 314 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR52N1Q8NH53 320 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR56B4Q8NH76 319 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 SAP25Q8TEE9 199 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ST8SIA1Q92185 356 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 SAT2Q96F10 170 aaPredicted RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAHD2AQ96GK7 314 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF426Q9BUY5 554 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 GGTLC1Q9BX51 225 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 OSBPL10Q9BXB5 764 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR10A4Q9H209 315 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 OSGEPL1Q9H4B0 414 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 RPAP3Q9H6T3 665 aaPredicted RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 CWH43Q9H720 699 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 CYP3A43Q9HB55 503 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 C8orf4Q9NR00 106 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 ACOXLQ9NUZ1 547 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 TMOD2Q9NZR1 351 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 HOOK1Q9UJC3 728 aaKnown RBP-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 FBXL3Q9UKT7 428 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 SLC17A4Q9Y2C5 497 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 TRAPPC1Q9Y5R8 145 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 DNAH2Q9P225 4427 aa-2.35□□□□□ -2.79
SNORA40.16-201ENST00000517238 DOCK4Q8N1I0 1966 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 MEIKINA0A087WXM9 373 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 LINC00854A0A1B0GVQ3 168 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 CLDN25C9JDP6 229 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 NVLO15381 856 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 POP7O75817 140 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 LY6HO94772 140 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR2C1O95371 312 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 GAPDHP04406 335 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 SOD3P08294 240 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 CCL5P13501 91 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 CCDC130P13994 396 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 MAT2AP31153 395 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 SPP2Q13103 211 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 ERN2Q76MJ5 926 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR8B12Q8NGG6 310 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR5D13Q8NGL4 314 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 MRPL53Q96EL3 112 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 CXorf58Q96LI9 332 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 HSD17B10Q99714 261 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 PDCL3Q9H2J4 239 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 IL26Q9NPH9 171 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 TRPV5Q9NQA5 729 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 RPRD1BQ9NQG5 326 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 YAE1D1Q9NRH1 226 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAM49BQ9NUQ9 324 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 TAS2R5Q9NYW4 299 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 PRO2289Q9P1D8 64 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 DIMT1Q9UNQ2 313 aaKnown RBP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 PUS1Q9Y606 427 aaKnown RBP eCLIP-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 MTCH2Q9Y6C9 303 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 LAMC1P11047 1609 aa-2.36□□□□□ -2.79
SNORA40.16-201ENST00000517238 UBE4BO95155 1302 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 A0A087WX48 190 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 LOC102723996A0A087X1L8 192 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR2T8A6NH00 312 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 GPR89AB7ZAQ6 455 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 CHMP2AO43633 222 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF737O75373 536 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 SLC22A5O76082 557 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 AQP8O94778 261 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 GPR89BP0CG08 455 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 CPMP14384 443 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 MPIP34949 423 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 RGS2P41220 211 aa-2.37□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF121P58317 390 aaPredicted RBP-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms