RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 PTGFRP43088 359 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 SMSP52788 366 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 RAD23AP54725 363 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 HOXC5Q00444 222 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 KLHL40Q2TBA0 621 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 LUZP6Q538Z0 58 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 SOHLH1Q5JUK2 328 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 PRAMEF8Q5VWM4 474 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 LGALS9CQ6DKI2 356 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 TRAT1Q6PIZ9 186 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 WASH2PQ6VEQ5 465 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 TEX43Q6ZNM6 134 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 TMEM179Q6ZVK1 233 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 VPS36Q86VN1 386 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 EFCAB13Q8IY85 973 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 LRRC17Q8N6Y2 441 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 Q8NFD4 153 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 OR5L2Q8NGL0 311 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 PNPT1Q8TCS8 783 aaKnown RBP-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 SDR42E1Q8WUS8 393 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 RAD51AP1Q96B01 352 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 CFAP36Q96G28 342 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 RAB33BQ9H082 229 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 VSIRQ9H7M9 311 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 RNF14Q9UBS8 474 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 SLC7A11Q9UPY5 501 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 ATP6V0A2Q9Y487 856 aa-1.67□□□□□ -2.68
SNORA40.13-201ENST00000516379 LRRC30A6NM36 301 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 TRDCB7Z8K6 153 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 DUX1O43812 170 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 VEGFDO43915 354 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 EIF1BO60739 113 aaKnown RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 UPK3AO75631 287 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 ETHE1O95571 254 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 ZNF705DP0CH99 300 aaPredicted RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 ZNF705BP0CI00 300 aaPredicted RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 POLR2EP19388 210 aaKnown RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 COX5AP20674 150 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 PRPS1L1P21108 318 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 HRH1P35367 487 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 EIF1P41567 113 aaKnown RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 RFX3P48380 749 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 NCBP1Q09161 790 aaKnown RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 TCP10Q12799 353 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 METTL21CQ5VZV1 264 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 H3F3CQ6NXT2 135 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 KDM8Q8N371 416 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 OR8K1Q8NGG5 319 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 ZNF251Q9BRH9 671 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 OR10A4Q9H209 315 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 PFDN4Q9NQP4 134 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 FAM49BQ9NUQ9 324 aa-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 KLK5Q9Y337 293 aaPredicted RBP-1.68□□□□□ -2.68
SNORA40.13-201ENST00000516379 BAZ1BQ9UIG0 1483 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 BAZ2BQ9UIF8 2168 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 LCTP09848 1927 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 A0A1B0GU33 70 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 ODF3BA8MYP8 253 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 STX7O15400 261 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 SLC7A4O43246 635 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 FKBP6O75344 327 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 UTS2O95399 124 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 PAHP00439 452 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 IGF1P05019 195 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 BLVRBP30043 206 aaPredicted RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 NPBWR2P48146 333 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 SUB1P53999 127 aaKnown RBP eCLIP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 PSG4Q00888 419 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 ZNF791Q3KP31 576 aaPredicted RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 TMEM176BQ3YBM2 270 aaPredicted RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 PRSS42Q7Z5A4 293 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 COA5Q86WW8 74 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 Q8NAQ8 132 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 ACBD4Q8NC06 268 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 ANKRD20A12PQ8NF67 263 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 OR51F2Q8NH61 342 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 MRGPRFQ96AM1 343 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 GBP5Q96PP8 586 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 HSD17B10Q99714 261 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 NAP1L4Q99733 375 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 PDCD1LG2Q9BQ51 273 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 NIT2Q9NQR4 276 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 BCAP29Q9UHQ4 241 aa-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 RPL36Q9Y3U8 105 aaKnown RBP-1.69□□□□□ -2.68
SNORA40.13-201ENST00000516379 TRAV39A0A0B4J263 110 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 ATP6V1G1O75348 118 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 UQCRBP14927 111 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 ETS2P15036 469 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 DDOSTP39656 456 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 GPR6P46095 362 aaPredicted RBP-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 HCAR3P49019 387 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 OSTNP61366 133 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 EMX1Q04741 257 aaPredicted RBP-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 CDH17Q12864 832 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 SRSF6Q13247 344 aaKnown RBP-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 BTN1A1Q13410 526 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 PRAMEF7Q5VXH5 474 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 LPCAT2Q7L5N7 544 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 OLIG3Q7RTU3 272 aa-1.7□□□□□ -2.68
SNORA40.13-201ENST00000516379 TUSC5Q8IXB3 177 aa-1.7□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms