RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 AMDHD2Q9Y303 409 aa17.66■□□□□ 0.42
USP53-208ENST00000514305 H0YJX3 145 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 SURF4O15260 269 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 RAD51DO75771 328 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 ITGA5P08648 1049 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 OR8G3PP0DMU2 310 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 SLC25A1P53007 311 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 ARF1P84077 181 aaKnown RBP17.65■□□□□ 0.42
USP53-208ENST00000514305 GLO1Q04760 184 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 GABRA6Q16445 453 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 ZIK1Q3SY52 487 aaPredicted RBP17.65■□□□□ 0.42
USP53-208ENST00000514305 C9orf135Q5VTT2 229 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 ZNF813Q6ZN06 617 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 PTCHD4Q6ZW05 846 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 ZNF627Q7L945 461 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 SLC37A3Q8NCC5 494 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 NPEPL1Q8NDH3 523 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 NSMAFQ92636 917 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 HRASLS5Q96KN8 279 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 GRIP2Q9C0E4 1043 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 ACTR6Q9GZN1 396 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 RACGAP1Q9H0H5 632 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 TOR3AQ9H497 397 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 RERGLQ9H628 205 aa17.65■□□□□ 0.42
USP53-208ENST00000514305 SRA1Q9HD15 236 aaKnown RBP17.65■□□□□ 0.42
USP53-208ENST00000514305 BEX4Q9NWD9 120 aaPredicted RBP17.65■□□□□ 0.42
USP53-208ENST00000514305 OR5H1A6NKK0 313 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 H7C1C5 153 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 MPZL2O60487 215 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 CD53P19397 219 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 LCN6P62502 163 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 MRPS34P82930 218 aaKnown RBP17.64■□□□□ 0.41
USP53-208ENST00000514305 GUCA2AQ02747 115 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 KRTAP21-3Q3LHN1 58 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 PHYHD1Q5SRE7 291 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 TMEM236Q5W0B7 351 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 GLB1L2Q8IW92 636 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 DHRSXQ8N5I4 330 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 OTULINQ96BN8 352 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 NMD3Q96D46 503 aaKnown RBP17.64■□□□□ 0.41
USP53-208ENST00000514305 NUAK2Q9H093 628 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 NELFAQ9H3P2 528 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 SEC61A2Q9H9S3 476 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 SIAEQ9HAT2 523 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 RPRD1BQ9NQG5 326 aaKnown RBP17.64■□□□□ 0.41
USP53-208ENST00000514305 TMEM38BQ9NVV0 291 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 B9D1Q9UPM9 204 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 MOKQ9UQ07 419 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 GMPPBQ9Y5P6 360 aa17.64■□□□□ 0.41
USP53-208ENST00000514305 FLNAP21333 2647 aaKnown RBP17.64■□□□□ 0.41
USP53-208ENST00000514305 VPS13CQ709C8 3753 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 LOC100130705A0A1B0GUX0 176 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 SLC2A10O95528 541 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 SNAP29O95721 258 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 LAP3P28838 519 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 CRMP1Q14194 572 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 C12orf73Q69YU5 71 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 LINGO2Q7L985 606 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 ZBTB46Q86UZ6 589 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 SLC22A24Q8N4F4 322 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 PROKR2Q8NFJ6 384 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 OR8J1Q8NGP2 316 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 POM121Q96HA1 1249 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 WFIKKN1Q96NZ8 548 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 APOL4Q9BPW4 351 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 DLL4Q9NR61 685 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 SLC17A5Q9NRA2 495 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 FBXL3Q9UKT7 428 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 ACANP16112 2415 aa17.63■□□□□ 0.41
USP53-208ENST00000514305 A0A1W2PPL8 197 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 OR6C68A6NDL8 312 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 SNTNA6NMZ2 147 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 SLC16A6O15403 523 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 TMCC2O75069 709 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 UBL3O95164 117 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 GGT2P36268 569 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 CAPZA2P47755 286 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 HSPA13P48723 471 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 PCBD1P61457 104 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 FMODQ06828 376 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 SGCAQ16586 387 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 TBRG1Q3YBR2 411 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 SLC36A2Q495M3 483 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 SLC35D3Q5M8T2 416 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 WDFY1Q8IWB7 410 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 CYB561A3Q8NBI2 242 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 WFDC11Q8NEX6 87 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 OR10H5Q8NGA6 315 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 BCL2L2Q92843 193 aaPredicted RBP17.62■□□□□ 0.41
USP53-208ENST00000514305 S100PBPQ96BU1 408 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 FAM118AQ9NWS6 357 aa17.62■□□□□ 0.41
USP53-208ENST00000514305 COA3Q9Y2R0 106 aaPredicted RBP17.62■□□□□ 0.41
USP53-208ENST00000514305 ARPC4-TTLL3A0A0A6YYG9 625 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 A0A1W2PPR1 153 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 PRODHO43272 600 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 TLX2O43763 284 aaPredicted RBP17.61■□□□□ 0.41
USP53-208ENST00000514305 HLA-DQA2P01906 255 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 CTLA4P16410 223 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 ZNF823P16415 610 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 MSR1P21757 451 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms