RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZNF620Q6ZNG0 422 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 LRRC74BQ6ZQY2 392 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 C16orf62Q7Z3J2 963 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 OR2T12Q8NG77 320 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 ZNF563Q8TA94 476 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 CCL17Q92583 94 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 ITPKCQ96DU7 683 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 TRNT1Q96Q11 434 aaKnown RBP7.65□□□□□ -1.18
NUP54-211ENST00000512151 PCDHAC1Q9H158 963 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 BCL2L10Q9HD36 194 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 NDE1Q9NXR1 346 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 ZNF224Q9NZL3 707 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 P2RX2Q9UBL9 471 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 EGFL7Q9UHF1 273 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 SLC7A8Q9UHI5 535 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 OSGIN1Q9UJX0 560 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 PRPF19Q9UMS4 504 aaKnown RBP7.65□□□□□ -1.18
NUP54-211ENST00000512151 WDR45Q9Y484 360 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 CHST2Q9Y4C5 530 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 TANC2Q9HCD6 1990 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 IGLV3-9A0A075B6K5 115 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 A0A0G2JPF8 293 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 ELOVL7A1L3X0 281 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 AGAP5A6NIR3 686 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 CLDN24A6NM45 220 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 A8MXK9 166 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 HNRNPCL2B2RXH8 293 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 HNRNPCL3B7ZW38 293 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 AP3D1O14617 1153 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 TPST1O60507 370 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 FKBP6O75344 327 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 STX11O75558 287 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 KRT36O76013 467 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 AK1P00568 194 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 IGHV2-70P01814 119 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 GUSBP08236 651 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 HNRNPCL4P0DMR1 293 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 CD79AP11912 226 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 RPS4Y1P22090 263 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 AQP1P29972 269 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 SLC6A9P48067 706 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 IDH2P48735 452 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 ANXA11P50995 505 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 CRISP3P54108 245 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 PCBP3P57721 371 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 RPS23P62266 143 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 GLO1Q04760 184 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 RBBP4Q09028 425 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 TMEM255AQ5JRV8 349 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 SAMD4BQ5PRF9 694 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 PHYHD1Q5SRE7 291 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 PRAMEF8Q5VWM4 474 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 PRAMEF7Q5VXH5 474 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 FOXB2Q5VYV0 432 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 FAM205BPQ63HN1 556 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 REEP3Q6NUK4 255 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 CCDC80Q76M96 950 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 COMTD1Q86VU5 262 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 VRK2Q86Y07 508 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 PAQR4Q8N4S7 273 aaPredicted RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 C11orf65Q8NCR3 313 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 HIPK4Q8NE63 616 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 STMN2Q93045 179 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 KCTD14Q9BQ13 255 aaPredicted RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 SPATA9Q9BWV2 254 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 SAP30LQ9HAJ7 183 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 THUMPD1Q9NXG2 353 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 STX18Q9P2W9 335 aaKnown RBP7.64□□□□□ -1.19
NUP54-211ENST00000512151 AP3M1Q9Y2T2 418 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 LRRC42Q9Y546 428 aa7.64□□□□□ -1.19
NUP54-211ENST00000512151 F5H0A9 414 aaPredicted RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 M0QX08 132 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 CXCR6O00574 342 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 ACOT8O14734 319 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 ZNF208O43345 1280 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 TPD52L2O43399 206 aaKnown RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 SLC43A1O75387 559 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 OPN1SWP03999 348 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 SBK2P0C263 348 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 FAM157BP0CG42 384 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 OR8G3PP0DMU2 310 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 THRBP10828 461 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 ZNF250P15622 560 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 FKBP2P26885 142 aaKnown RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 TACR3P29371 465 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 KDELR2P33947 212 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 SLC34A1Q06495 639 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 EGR3Q06889 387 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 RCN1Q15293 331 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 GSG1Q2KHT4 349 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 GLYATQ6IB77 296 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 RGS7BPQ6MZT1 257 aaPredicted RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 ERICH5Q6P6B1 374 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 EIF3MQ7L2H7 374 aaKnown RBP7.63□□□□□ -1.19
NUP54-211ENST00000512151 ZNF584Q8IVC4 421 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 CMIPQ8IY22 773 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 KDM8Q8N371 416 aa7.63□□□□□ -1.19
NUP54-211ENST00000512151 ZSCAN4Q8NAM6 433 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms