RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ZER1Q7Z7L7 766 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 ZDHHC21Q8IVQ6 265 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 RAB1BQ9H0U4 201 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 RERGLQ9H628 205 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 NDE1Q9NXR1 346 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 SLC7A8Q9UHI5 535 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 IER3IP1Q9Y5U9 82 aa11.42□□□□□ -0.58
RNF4-215ENST00000511843 SONP18583 2426 aaKnown RBP11.42□□□□□ -0.58
RNF4-215ENST00000511843 LOC100509620A0A075B734 347 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 SLC22A23A1A5C7 686 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 VWC2LB2RUY7 222 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 XKRYO14609 159 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 NDUFB2O95178 105 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 PPP1R3DO95685 299 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 CSF3P09919 207 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 T-ENOLP0DO92 83 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 NR2C1P13056 603 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 DAOP14920 347 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 SLC25A16P16260 332 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 CTLA4P16410 223 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 ITGA2P17301 1181 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 RRM2P31350 389 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 APLNRP35414 380 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 PPP2R2BQ00005 443 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 PSG4Q00888 419 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 GLO1Q04760 184 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 TMEM249Q2WGJ8 235 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 SPATA46Q5T0L3 261 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 FAM27BQ5VT28 67 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 FOXL2NBQ6ZUU3 175 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 PTCHD4Q6ZW05 846 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 GTF3AQ92664 365 aaKnown RBP11.41□□□□□ -0.58
RNF4-215ENST00000511843 MCUR1Q96AQ8 359 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 PIMREGQ9BSJ6 248 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 ZNF416Q9BWM5 594 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 OR2H1Q9GZK4 316 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 KCNN2Q9H2S1 579 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 NRIP3Q9NQ35 241 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 REV1Q9UBZ9 1251 aa11.41□□□□□ -0.58
RNF4-215ENST00000511843 ANK3Q12955 4377 aaKnown RBP11.4□□□□□ -0.58
RNF4-215ENST00000511843 IGHV4-61A0A0C4DH41 118 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 A0A1W2PPW3 197 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 PRSS37A4D1T9 235 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 C5orf49A4QMS7 147 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 M0R233 179 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 SYNGR3O43761 229 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 CD5LO43866 347 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 MPZL1O95297 269 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 GPANK1O95872 356 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 LCKP06239 509 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 NAT2P11245 290 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 MSR1P21757 451 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
RNF4-215ENST00000511843 STOMP27105 288 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 WNT5AP41221 380 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 NR4A2P43354 598 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 RPS23P62266 143 aaKnown RBP11.4□□□□□ -0.58
RNF4-215ENST00000511843 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
RNF4-215ENST00000511843 PPP1R8Q12972 351 aaKnown RBP11.4□□□□□ -0.58
RNF4-215ENST00000511843 RGS7BPQ6MZT1 257 aaPredicted RBP11.4□□□□□ -0.58
RNF4-215ENST00000511843 PRIMA1Q86XR5 153 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 ZNF101Q8IZC7 436 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 FANK1Q8TC84 345 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 CLPTM1LQ96KA5 538 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 POM121L2Q96KW2 1035 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 TSSK2Q96PF2 358 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 BPESC1Q9GZL8 116 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 SYT4Q9H2B2 425 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 IL1RAPQ9NPH3 570 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 POLE4Q9NR33 117 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 ACTR3BQ9P1U1 418 aa11.4□□□□□ -0.58
RNF4-215ENST00000511843 LOC390937A0A1W2PQ73 354 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 TCRBV5S2A0A599 114 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 OR10H3O60404 316 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 SLC16A7O60669 478 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 NCR1O76036 304 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 SNAP29O95721 258 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 PTHP01270 115 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 CST2P09228 141 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 ZNF16P17020 682 aaPredicted RBP11.39□□□□□ -0.59
RNF4-215ENST00000511843 SDHAP31040 664 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 CDKN2AP42771 156 aaKnown RBP11.39□□□□□ -0.59
RNF4-215ENST00000511843 MNAT1P51948 309 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 UCP2P55851 309 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 SMIM11AP58511 58 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 MS4A2Q01362 244 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 TMEM255AQ5JRV8 349 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 SMARCD3Q6STE5 483 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 OR9Q2Q8NGE9 314 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 OR1J2Q8NGS2 313 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 OR1J1Q8NGS3 322 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 FNDC8Q8TC99 324 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 NEU4Q8WWR8 484 aaPredicted RBP11.39□□□□□ -0.59
RNF4-215ENST00000511843 SAMD8Q96LT4 415 aa11.39□□□□□ -0.59
RNF4-215ENST00000511843 ERMAPQ96PL5 475 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms