RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 FPR3P25089 353 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 APEX1P27695 318 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 SDHAP31040 664 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 IFNGR2P38484 337 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 GUCA1AP43080 201 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 NUDT6P53370 316 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 RIPPLY3P57055 190 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 ZNF770Q6IQ21 691 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 PGBD2Q6P3X8 592 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 UGT2A3Q6UWM9 527 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 PTCHD4Q6ZW05 846 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 SVOPLQ8N434 492 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 MAPK1IP1LQ8NDC0 245 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 OR4C15Q8NGM1 316 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 OR1J2Q8NGS2 313 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 RASD2Q96D21 266 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 ZNF570Q96NI8 536 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 SORCS2Q96PQ0 1159 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 VRK1Q99986 396 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 MRPL37Q9BZE1 423 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 C1orf198Q9H425 327 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 FBXO9Q9UK97 447 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 TIMM10BQ9Y5J6 103 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 LOC100509620A0A075B734 347 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 TEX13CA0A0J9YWL9 993 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 TNFRSF11BO00300 401 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 SOCS2O14508 198 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 ARPC3O15145 178 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 SNAP29O95721 258 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 GASTP01350 101 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 HEXAP06865 529 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 CTLA4P16410 223 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 PCSK6P29122 969 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 PPOXP50336 477 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 UCP2P55851 309 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 GALK2Q01415 458 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 ENDOGQ14249 297 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 SYT9Q86SS6 491 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 ZNF525Q8N782 197 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 AKR7LQ8NHP1 331 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 POP5Q969H6 163 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 ASB9Q96DX5 294 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 POM121L2Q96KW2 1035 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 SAMD8Q96LT4 415 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 WACQ9BTA9 647 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 ZNF416Q9BWM5 594 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 OR2H1Q9GZK4 316 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 WNT5BQ9H1J7 359 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 LRMDAQ9H2I8 198 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 OR52D1Q9H346 318 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 SLC7A8Q9UHI5 535 aa13.88□□□□□ -0.19
PDLIM5-216ENST00000511767 FN1P02751 2386 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 A0A096LNT2 108 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 SLC16A7O60669 478 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 KHDRBS3O75525 346 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 ADRA2AP08913 450 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 HOXB4P17483 251 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 MSR1P21757 451 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 STOMP27105 288 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 RAD52P43351 418 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 HSF2Q03933 536 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 KRR1Q13601 381 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 FAM98BQ52LJ0 330 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 CLEC2AQ6UVW9 174 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 LINC00471Q8N535 108 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 C10orf105Q8TEF2 133 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 ERMAPQ96PL5 475 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 DDOQ99489 341 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 BTBD10Q9BSF8 475 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 NUAK2Q9H093 628 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 RAB1BQ9H0U4 201 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 SYT4Q9H2B2 425 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 CDH20Q9HBT6 801 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 EMC7Q9NPA0 242 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 CCNB1IP1Q9NPC3 277 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 COA3Q9Y2R0 106 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 HIVEP2P31629 2446 aa13.87□□□□□ -0.19
PDLIM5-216ENST00000511767 A0A1W2PPL8 197 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 GYG2O15488 501 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 SYNGR3O43761 229 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 IDH3BO43837 385 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 MPZL1O95297 269 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 PPP1R3DO95685 299 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 FAM157BP0CG42 384 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 ZNF250P15622 560 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 SLC6A6P31641 620 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 APLNRP35414 380 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 PCBD1P61457 104 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 KRTAP1-1Q07627 177 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 TBC1D28Q2M2D7 210 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 OR2T5Q6IEZ7 315 aa13.86□□□□□ -0.19
PDLIM5-216ENST00000511767 ALDH16A1Q8IZ83 802 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms