RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 BCO1Q9HAY6 547 aa13.5□□□□□ -0.25
SCLT1-209ENST00000511426 IKZF2Q9UKS7 526 aa13.5□□□□□ -0.25
SCLT1-209ENST00000511426 IGKV1D-43A0A0B4J1Z2 117 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 TRBV2A0A0J9YWF9 115 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 AQP7O14520 342 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 UPK3AO75631 287 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 SPINK2P20155 84 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 EDNRAP25101 427 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
SCLT1-209ENST00000511426 RIDAP52758 137 aaKnown RBP13.49□□□□□ -0.25
SCLT1-209ENST00000511426 FABP5Q01469 135 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 LRFN4Q6PJG9 635 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 ARL9Q6T311 187 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 WDFY1Q8IWB7 410 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 YIPF7Q8N8F6 280 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 TEX19Q8NA77 164 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 SMAP2Q8WU79 429 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-209ENST00000511426 C11orf40Q8WZ69 217 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 TM9SF2Q99805 663 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 ABHD6Q9BV23 337 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 TMED9Q9BVK6 235 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 SLIRPQ9GZT3 109 aaKnown RBP13.49□□□□□ -0.25
SCLT1-209ENST00000511426 PRDM14Q9GZV8 571 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 NELFAQ9H3P2 528 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 C1orf198Q9H425 327 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 NIPAL2Q9H841 368 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 CYB5R1Q9UHQ9 305 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 KLHDC2Q9Y2U9 406 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 CSAG2Q9Y5P2 127 aa13.49□□□□□ -0.25
SCLT1-209ENST00000511426 NCKAP5O14513 1909 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 DMXL1Q9Y485 3027 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 TMEM212A6NML5 194 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 E9PI62 339 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 DHHO43323 396 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 NPR2P20594 1047 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
SCLT1-209ENST00000511426 ALKBH1Q13686 389 aaKnown RBP13.48□□□□□ -0.25
SCLT1-209ENST00000511426 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
SCLT1-209ENST00000511426 MEP1BQ16820 701 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 AAED1Q7RTV5 226 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 KRT77Q7Z794 578 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 ZFP41Q8N8Y5 198 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 ST7LQ8TDW4 575 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 RNF133Q8WVZ7 376 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 NSMAFQ92636 917 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 GHSRQ92847 366 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 TMEM203Q969S6 136 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 ULBP2Q9BZM5 246 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 NXF2Q9GZY0 626 aaKnown RBP13.48□□□□□ -0.25
SCLT1-209ENST00000511426 POLE4Q9NR33 117 aa13.48□□□□□ -0.25
SCLT1-209ENST00000511426 SIRT4Q9Y6E7 314 aaPredicted RBP13.48□□□□□ -0.25
SCLT1-209ENST00000511426 PTPRZ1P23471 2315 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 PNMA8CA0A1B0GUJ8 204 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 ARL6IP5O75915 188 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 OR8G3PP0DMU2 310 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 MSR1P21757 451 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 MAPK3P27361 379 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 MTNR1BP49286 362 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 RORCP51449 518 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 MRPS34P82930 218 aaKnown RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 RNFT1Q5M7Z0 435 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 CARD17Q5XLA6 110 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 C22orf42Q6IC83 251 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 OR2AJ1Q8NGZ0 328 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 CPT1CQ8TCG5 803 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 ROBO4Q8WZ75 1007 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 SARAFQ96BY9 339 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 WDYHV1Q96HA8 205 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 ZNF845Q96IR2 970 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 PRRG4Q9BZD6 226 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 COMMD4Q9H0A8 199 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 GLRX2Q9NS18 164 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 ZNF281Q9Y2X9 895 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 A0A075B6Q4 140 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 A0A1W2PPL8 197 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 OR14I1A6ND48 311 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 TMEM127O75204 238 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 GPANK1O95872 356 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 SELENOPP49908 381 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 TMPRSS3P57727 454 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 SLC3A1Q07837 685 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 MOGQ16653 247 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 LRRC69Q6ZNQ3 347 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 DCXRQ7Z4W1 244 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 TPRA1Q86W33 373 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 CROCCP3Q8IVE0 287 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 GPR137CQ8N3F9 429 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 ABHD4Q8TB40 342 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 TBC1D15Q8TC07 691 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 SNRNP27Q8WVK2 155 aaKnown RBP13.47□□□□□ -0.25
SCLT1-209ENST00000511426 S100ZQ8WXG8 99 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 AP3S1Q92572 193 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 SLC25A46Q96AG3 418 aa13.47□□□□□ -0.25
SCLT1-209ENST00000511426 DEFB127Q9H1M4 99 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms