RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 XKRYO14609 159 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 IMPA2O14732 288 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 FPR3P25089 353 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 APEX1P27695 318 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 SDHAP31040 664 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 IFNGR2P38484 337 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 GUCA1AP43080 201 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 NUDT6P53370 316 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 RIPPLY3P57055 190 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF770Q6IQ21 691 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 PGBD2Q6P3X8 592 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 UGT2A3Q6UWM9 527 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 PTCHD4Q6ZW05 846 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 SVOPLQ8N434 492 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 MAPK1IP1LQ8NDC0 245 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 OR4C15Q8NGM1 316 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 OR1J2Q8NGS2 313 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 RASD2Q96D21 266 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF570Q96NI8 536 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 SORCS2Q96PQ0 1159 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 VRK1Q99986 396 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 MRPL37Q9BZE1 423 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 C1orf198Q9H425 327 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 FBXO9Q9UK97 447 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 TIMM10BQ9Y5J6 103 aa13.89□□□□□ -0.19
PDLIM5-212ENST00000509333 LOC100509620A0A075B734 347 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 TEX13CA0A0J9YWL9 993 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 TNFRSF11BO00300 401 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 SOCS2O14508 198 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 ARPC3O15145 178 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 SNAP29O95721 258 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 GASTP01350 101 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 HEXAP06865 529 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 CTLA4P16410 223 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 PCSK6P29122 969 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 PPOXP50336 477 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 UCP2P55851 309 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 GALK2Q01415 458 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 ENDOGQ14249 297 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 SYT9Q86SS6 491 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF525Q8N782 197 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 AKR7LQ8NHP1 331 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 POP5Q969H6 163 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 ASB9Q96DX5 294 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 POM121L2Q96KW2 1035 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 SAMD8Q96LT4 415 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 WACQ9BTA9 647 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF416Q9BWM5 594 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 OR2H1Q9GZK4 316 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 WNT5BQ9H1J7 359 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 LRMDAQ9H2I8 198 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 OR52D1Q9H346 318 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 SLC7A8Q9UHI5 535 aa13.88□□□□□ -0.19
PDLIM5-212ENST00000509333 FN1P02751 2386 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 A0A096LNT2 108 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 SLC16A7O60669 478 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 KHDRBS3O75525 346 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 ADRA2AP08913 450 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 HOXB4P17483 251 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 MSR1P21757 451 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 STOMP27105 288 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 RAD52P43351 418 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 HSF2Q03933 536 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 KRR1Q13601 381 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 FAM98BQ52LJ0 330 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 CLEC2AQ6UVW9 174 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 LINC00471Q8N535 108 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 C10orf105Q8TEF2 133 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 ERMAPQ96PL5 475 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 DDOQ99489 341 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 BTBD10Q9BSF8 475 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 NUAK2Q9H093 628 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 RAB1BQ9H0U4 201 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 SYT4Q9H2B2 425 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 CDH20Q9HBT6 801 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 EMC7Q9NPA0 242 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 CCNB1IP1Q9NPC3 277 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 COA3Q9Y2R0 106 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 HIVEP2P31629 2446 aa13.87□□□□□ -0.19
PDLIM5-212ENST00000509333 A0A1W2PPL8 197 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 GYG2O15488 501 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 SYNGR3O43761 229 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 IDH3BO43837 385 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 MPZL1O95297 269 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 PPP1R3DO95685 299 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 FAM157BP0CG42 384 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF250P15622 560 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 SLC6A6P31641 620 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 APLNRP35414 380 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 PCBD1P61457 104 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 KRTAP1-1Q07627 177 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 TBC1D28Q2M2D7 210 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms