RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CAPN7Q9Y6W3 813 aa3.96□□□□□ -1.78
NUP54-206ENST00000508465 ANKHD1Q8IWZ3 2542 aaKnown RBP3.96□□□□□ -1.78
NUP54-206ENST00000508465 ROS1P08922 2347 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 TRAV36DV7A0A075B6V5 113 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 GMNCA6NCL1 334 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PRORSD1PA6NEY8 169 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 AQP7P3A6NL99 342 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 FTCDNL1E5RQL4 147 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 KPNA4O00629 521 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 EIF1BO60739 113 aaKnown RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 NPIPB7O75200 414 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 UPK3AO75631 287 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 RAD51DO75771 328 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 SERPINI2O75830 405 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 KRT33AO76009 404 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 AHSA1O95433 338 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 CH25HO95992 272 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 GRPP07492 148 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ITGA5P08648 1049 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PNMTP11086 282 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 GGT1P19440 569 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PCGF2P35227 344 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 YAP1P46937 504 aaKnown RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 PCYT1AP49585 367 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 CLDN17P56750 224 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 GNGT1P63211 74 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 TUBA1BP68363 451 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 NKX6-1P78426 367 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 ARF1P84077 181 aaKnown RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 LIPEQ05469 1076 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 BSPH1Q075Z2 132 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 RBBP4Q09028 425 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PMS2P3Q13401 168 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PDK3Q15120 406 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PPA1Q15181 289 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 GABRA6Q16445 453 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 NRF1Q16656 503 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 DEFB113Q30KQ7 82 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ZNF585BQ52M93 769 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 HIKESHIQ53FT3 197 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 CYBRD1Q53TN4 286 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 BEX5Q5H9J7 111 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ALG10BQ5I7T1 473 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 KHDC1LQ5JSQ8 128 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ENTPD8Q5MY95 495 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ABLIM2Q6H8Q1 611 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ADAM5Q6NVV9 412 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 NIPAL3Q6P499 406 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ULK3Q6PHR2 472 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PAQR6Q6TCH4 344 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PAMR1Q6UXH9 720 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ZNF704Q6ZNC4 412 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 Q71RC1 249 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 TUBA1AQ71U36 451 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 H1FNTQ75WM6 255 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 SPATA21Q7Z572 469 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 NET1Q7Z628 596 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 CPLX4Q7Z7G2 160 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 CARM1Q86X55 608 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 LRRC17Q8N6Y2 441 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 LSMEM1Q8N8F7 131 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PCYOX1LQ8NBM8 494 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 WFDC11Q8NEX6 87 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 MFSD8Q8NHS3 518 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 DNAJA4Q8WW22 397 aaPredicted RBP3.95□□□□□ -1.78
NUP54-206ENST00000508465 SLC47A1Q96FL8 570 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 PERPQ96FX8 193 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 TPD52L3Q96J77 140 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ARHGDIGQ99819 225 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 SMR3AQ99954 134 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 FOXC2Q99958 501 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 SIKE1Q9BRV8 207 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 FANCFQ9NPI8 374 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 NPAP1Q9NZP6 1156 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 RHCGQ9UBD6 479 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 RIMS3Q9UJD0 308 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 SLC7A7Q9UM01 511 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 SH3GLB1Q9Y371 365 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ALPK2Q86TB3 2170 aa3.95□□□□□ -1.78
NUP54-206ENST00000508465 ZANQ9Y493 2812 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 ZNF469Q96JG9 3925 aaPredicted RBP3.94□□□□□ -1.78
NUP54-206ENST00000508465 NF1P21359 2839 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 A0A087WUJ7 227 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 A0A0B4J2E0 115 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 A0A1B0GX12 115 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 OR5H1A6NKK0 313 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 PRSS47A8MTI9 375 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 C11orf98E9PRG8 122 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 M0R1B8 84 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 M0R3G1 203 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 PDLIM1O00151 329 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 NME4O00746 187 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 PLPP3O14495 311 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 HS3ST1O14792 307 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 ATP8B1O43520 1251 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 DNPH1O43598 174 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 CCDC22O60826 627 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 SMPD2O60906 423 aa3.94□□□□□ -1.78
NUP54-206ENST00000508465 SEC14L2O76054 403 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms