RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RPS27P42677 84 aaKnown RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 MTNR1AP48039 350 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 CXCR4P61073 352 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 TMED1Q13445 227 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 KCNMB1Q16558 191 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 ZNF813Q6ZN06 617 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 ERI1Q8IV48 349 aaKnown RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 ZNF786Q8N393 782 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 OR4F15Q8NGB8 312 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 OR51G2Q8NGK0 314 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 LILRB4Q8NHJ6 448 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 SMAP2Q8WU79 429 aaPredicted RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 SGCDQ92629 289 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 GGHQ92820 318 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 BCL2L2Q92843 193 aaPredicted RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 LGALS12Q96DT0 336 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 RNFT2Q96EX2 444 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 INTS14Q96SY0 518 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 RPL36Q9Y3U8 105 aaKnown RBP12.44□□□□□ -0.42
RNF4-208ENST00000507247 HCFC1P51610 2035 aa12.44□□□□□ -0.42
RNF4-208ENST00000507247 A0A096LPE4 126 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 A0A1W2PPZ6 126 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 NKX2-6A6NCS4 301 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 SNTNA6NMZ2 147 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 HRGP04196 525 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 ADRA2AP08913 450 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 SBK2P0C263 348 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 MSR1P21757 451 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 CCKARP32238 428 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 ASCL1P50553 236 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 BLVRAP53004 296 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 FAM27E3Q08E93 113 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 ENDOGQ14249 297 aaKnown RBP12.43□□□□□ -0.42
RNF4-208ENST00000507247 P2RY6Q15077 328 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 GABRA6Q16445 453 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 SLC25A35Q3KQZ1 300 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 SFRP5Q5T4F7 317 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 FAM27BQ5VT28 67 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 SKA3Q8IX90 412 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 SLC22A24Q8N4F4 322 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 OR6N2Q8NGY6 317 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 FGFBP3Q8TAT2 258 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
RNF4-208ENST00000507247 SH3GL3Q99963 347 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 ZNF416Q9BWM5 594 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 MRPS18AQ9NVS2 196 aaKnown RBP12.43□□□□□ -0.42
RNF4-208ENST00000507247 FKBP14Q9NWM8 211 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 PAK1IP1Q9NWT1 392 aaPredicted RBP12.43□□□□□ -0.42
RNF4-208ENST00000507247 GALNT8Q9NY28 637 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 ZNF224Q9NZL3 707 aa12.43□□□□□ -0.42
RNF4-208ENST00000507247 EXOGQ9Y2C4 368 aaKnown RBP12.43□□□□□ -0.42
RNF4-208ENST00000507247 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 ZNF503-AS2A6NEH8 195 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 ZNF593O00488 134 aaPredicted RBP12.42□□□□□ -0.42
RNF4-208ENST00000507247 CCDC159P0C7I6 412 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 OR8G3PP0DMU2 310 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 NPR2P20594 1047 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 PSMB1P20618 241 aaKnown RBP12.42□□□□□ -0.42
RNF4-208ENST00000507247 CRHBPP24387 322 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 CD79BP40259 229 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 ENTPD1P49961 510 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 HCCSP53701 268 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 ADAM8P78325 824 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 TBRG1Q3YBR2 411 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 HIKESHIQ53FT3 197 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 RBM48Q5RL73 367 aaKnown RBP12.42□□□□□ -0.42
RNF4-208ENST00000507247 ANKRD16Q6P6B7 361 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 AHSA2Q719I0 299 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
RNF4-208ENST00000507247 SLC16A9Q7RTY1 509 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 LINC00346Q8IVM7 164 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 OR52I1Q8NGK6 324 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 SIAEQ9HAT2 523 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
RNF4-208ENST00000507247 PSORS1C1Q9UIG5 152 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 COPS3Q9UNS2 423 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 MYRFQ9Y2G1 1151 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 LHFPL6Q9Y693 200 aa12.42□□□□□ -0.42
RNF4-208ENST00000507247 J3QRE1 110 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 CST2P09228 141 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 SPARCP09486 303 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 PATE4P0C8F1 98 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 PIPP12273 146 aaPredicted RBP12.41□□□□□ -0.42
RNF4-208ENST00000507247 ZNF823P16415 610 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
RNF4-208ENST00000507247 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
RNF4-208ENST00000507247 CSNK2BP67870 215 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 TUBA1BP68363 451 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 TUBA4AP68366 448 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 TGFBR3Q03167 851 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 MVKQ03426 396 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 PIGFQ07326 219 aa12.41□□□□□ -0.42
RNF4-208ENST00000507247 POU4F2Q12837 409 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms