RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ZNF32P17041 273 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 TCN1P20061 433 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 CRYBB2P43320 205 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 LIPEQ05469 1076 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 LAPTM4AQ15012 233 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 MAD2L1BPQ15013 274 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 SGCAQ16586 387 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 CGB2Q6NT52 195 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 ZNF730Q6ZMV8 503 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 FKBP9P1Q75LS8 142 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 NRMQ8IXM6 262 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 OR51F2Q8NH61 342 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 NABP1Q96AH0 204 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 RAB39BQ96DA2 213 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 ELMOD3Q96FG2 381 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 COG8Q96MW5 612 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 KRCC1Q9NPI7 259 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 ZNF275Q9NSD4 429 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 CMTM6Q9NX76 183 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 MYEF2Q9P2K5 600 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 RPS6KA6Q9UK32 745 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 UGT2A1Q9Y4X1 527 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 TRAV20A0A0B4J274 112 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 LYNX1G3V0Z9 82 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 XKRYO14609 159 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 TCF21O43680 179 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 GMNNO75496 209 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 RP2O75695 350 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 SLC2A10O95528 541 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 MSMBP08118 114 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 LYNX1P0DP58 116 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 COX5BP10606 129 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 COX4I1P13073 169 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 MSR1P21757 451 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 CCNOP22674 350 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 COL8A2P25067 703 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 SCRN3Q0VDG4 424 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 TOP3AQ13472 1001 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 TRIP10Q15642 601 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 MBOAT2Q6ZWT7 520 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 CLDND2Q8NHS1 167 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 NSMAFQ92636 917 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 RAB1CQ92928 201 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 TMEM186Q96B77 213 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 CMTM5Q96DZ9 223 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 EGLN1Q9GZT9 426 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 GRHPRQ9UBQ7 328 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 FZR1Q9UM11 496 aa12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 FAM32AQ9Y421 112 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-203ENST00000507004 STAB1Q9NY15 2570 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 IGHV1-69-2A0A0G2JMI3 117 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 C5orf49A4QMS7 147 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 TPD52L2O43399 206 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF682O95780 498 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 CLPTM1O96005 669 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 ADH4P08319 380 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 CD14P08571 375 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 CCL2P13500 99 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 IL2RGP31785 369 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 MDH1P40925 334 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF81P51508 661 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 SLC7A2P52569 658 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 PSG4Q00888 419 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 GUCY1A3Q02108 690 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 HFEQ30201 348 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 GPR139Q6DWJ6 353 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 LRRC75AQ8NAA5 344 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 NPEPL1Q8NDH3 523 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 ICA1LQ8NDH6 482 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 OR51A7Q8NH64 312 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 YIPF5Q969M3 257 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 SOX7Q9BT81 388 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 OR2H1Q9GZK4 316 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 SAP30LQ9HAJ7 183 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 ARMCX1Q9P291 453 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 ZDHHC8Q9ULC8 765 aa12.32□□□□□ -0.44
HMGCS1-203ENST00000507004 A0A087WUU8 490 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 J3QW42 95 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 PIP5K1CO60331 668 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 NCR1O76036 304 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 GAAP10253 952 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 GSTM3P21266 225 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 LAP3P28838 519 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 CDAP32320 146 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 MAGEB1P43366 347 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 CCL8P80075 99 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 FMODQ06828 376 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 CCNIQ14094 377 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 ZBED5Q49AG3 693 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 ACSM5Q6NUN0 579 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms