RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ICOSLGO75144 302 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 OR8G3PP0DMU2 310 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 CD37P11049 281 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 LYL1P12980 280 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 TBPP20226 339 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 IL13RA1P78552 427 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 NR0B2Q15466 257 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 MST1LQ2TV78 715 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 FAM76BQ5HYJ3 339 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 FHL5Q5TD97 284 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 RBMS3Q6XE24 437 aaKnown RBP14.39□□□□□ -0.11
SCLT1-208ENST00000506368 CDC20BQ86Y33 519 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 PAQR4Q8N4S7 273 aaPredicted RBP14.39□□□□□ -0.11
SCLT1-208ENST00000506368 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 CYB5D2Q8WUJ1 264 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 ING5Q8WYH8 240 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 DCBLD2Q96PD2 775 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 TINAGL1Q9GZM7 467 aaPredicted RBP14.39□□□□□ -0.11
SCLT1-208ENST00000506368 CYTL1Q9NRR1 136 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 C2orf74A8MZ97 194 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 LINC01565O15544 149 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 OR2T1O43869 369 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 RPP14O95059 124 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 FARS2O95363 451 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SFTA3P0C7M3 94 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 NFYBP25208 207 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 CMPK1P30085 196 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 GLP1RP43220 463 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 MAGEB1P43366 347 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 RAB5CP51148 216 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 EFNB2P52799 333 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 RPS4XP62701 263 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SRSF3P84103 164 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 FABP9Q0Z7S8 132 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 ATXN7L3Q14CW9 347 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 FCRL6Q6DN72 434 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 ZNF584Q8IVC4 421 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 DCUN1D4Q92564 292 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 C14orf79Q96F83 325 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 C6orf106Q9H6K1 298 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 PRMT8Q9NR22 394 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SLC23A2Q9UGH3 650 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 APOBEC3BQ9UH17 382 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 DBX1A6NMT0 343 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 PRICKLE3O43900 615 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 FBXO24O75426 580 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 LRG1P02750 347 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 DCNP07585 359 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 CPMP14384 443 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 MUC1P15941 1255 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 DVL1P1P54792 670 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 BTN3A2P78410 334 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 PLA2G7Q13093 441 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 PAPD4Q6PIY7 484 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 COMMD1Q8N668 190 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 COL26A1Q96A83 441 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SLC41A2Q96JW4 573 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SERINC2Q96SA4 455 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 MICU1Q9BPX6 476 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 GPR174Q9BXC1 333 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 SLC46A2Q9BY10 475 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 LMAN2LQ9H0V9 348 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 ADAP2Q9NPF8 381 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 TREM2Q9NZC2 230 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 DHCR7Q9UBM7 475 aaKnown RBP14.38□□□□□ -0.11
SCLT1-208ENST00000506368 DNAJB11Q9UBS4 358 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 GHRLQ9UBU3 117 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 FBXO4Q9UKT5 387 aa14.38□□□□□ -0.11
SCLT1-208ENST00000506368 A0A0B4J2A0 478 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 TMEM72A0PK05 275 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 MEGF11A6BM72 1044 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 KAT7O95251 611 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 NGFRP08138 427 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ITGA5P08648 1049 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-208ENST00000506368 RAB2AP61019 212 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 HYAL1Q12794 435 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 Q3ZCU0 254 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 RNASE10Q5GAN6 216 aaKnown RBP14.37□□□□□ -0.11
SCLT1-208ENST00000506368 EMC4Q5J8M3 183 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 OR2L3Q8NG85 312 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 NT5CQ8TCD5 201 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ZNRF4Q8WWF5 429 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 AQP10Q96PS8 301 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ELF4Q99607 663 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-208ENST00000506368 OCSTAMPQ9BR26 566 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 PARP11Q9NR21 331 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-208ENST00000506368 CKLFQ9UBR5 152 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 SHPKQ9UHJ6 478 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 CSAG2Q9Y5P2 127 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 HCFC2Q9Y5Z7 792 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 TBC1D3IA0A087WXS9 549 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 MEIS3P1A6NDR6 274 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 PRR32B1ATL7 298 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 AP4M1O00189 453 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 PET100P0DJ07 73 aa14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ZNF10P21506 573 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-208ENST00000506368 ACAA2P42765 397 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms