RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HTRA1Q92743 480 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 CDH20Q9HBT6 801 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 POLE4Q9NR33 117 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 IL20Q9NYY1 176 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 DNAJB9Q9UBS3 223 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 BAIAP2Q9UQB8 552 aa14.46□□□□□ -0.09
SNCA-209ENST00000506244 SLC16A7O60669 478 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 GASTP01350 101 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 MMP7P09237 267 aaPredicted RBP14.45□□□□□ -0.1
SNCA-209ENST00000506244 PATE4P0C8F1 98 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 CTLA4P16410 223 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 LAP3P28838 519 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 APLNRP35414 380 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 CDKN1AP38936 164 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 ADAM8P78325 824 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 COX10Q12887 443 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 PPP1R8Q12972 351 aaKnown RBP14.45□□□□□ -0.1
SNCA-209ENST00000506244 CLEC12AQ5QGZ9 265 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 C11orf71Q6IPW1 123 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 LEG1Q6P5S2 330 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 CD300LDQ6UXZ3 194 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 PTCHD4Q6ZW05 846 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 SYT9Q86SS6 491 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 GLB1L2Q8IW92 636 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 ALDH16A1Q8IZ83 802 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 FGFBP3Q8TAT2 258 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 CACNG6Q9BXT2 260 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 EGLN3Q9H6Z9 239 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 ZNF556Q9HAH1 456 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 PMF1-BGLAPU3KQ54 211 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 ARID1AO14497 2285 aa14.45□□□□□ -0.1
SNCA-209ENST00000506244 B9A039 149 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 H7C417 338 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 SNAP29O95721 258 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 CD8AP01732 235 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 OR4A8P0C604 315 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 ZNF35P13682 527 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 ZNF32P17041 273 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 NR4A1P22736 598 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 SERPINF1P36955 418 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 HGFACQ04756 655 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 SCRN3Q0VDG4 424 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 EFNB3Q15768 340 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 PABPC1L2AQ5JQF8 200 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 KRT80Q6KB66 452 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 VHLLQ6RSH7 139 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 UNQ6126/PRO20091Q6UXV3 157 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 YTHDF3Q7Z739 585 aaKnown RBP14.44□□□□□ -0.1
SNCA-209ENST00000506244 ZNF584Q8IVC4 421 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 OR2T33Q8NG76 320 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 TEX47Q8TBZ9 253 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 RACGAP1Q9H0H5 632 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 RERGLQ9H628 205 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 TIMM10BQ9Y5J6 103 aa14.44□□□□□ -0.1
SNCA-209ENST00000506244 BHLHE40O14503 412 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 FCGR1AP12314 374 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 HIST1H1CP16403 213 aaKnown RBP14.43□□□□□ -0.1
SNCA-209ENST00000506244 CDKN2AP42771 156 aaKnown RBP14.43□□□□□ -0.1
SNCA-209ENST00000506244 ERFP50548 548 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 GLO1Q04760 184 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 AQP6Q13520 282 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 ADIPOQQ15848 244 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 ASRGL1Q7L266 308 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 OR4K13Q8NH42 304 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 DNAJC9Q8WXX5 260 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 FBXO17Q96EF6 278 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 NMNAT3Q96T66 252 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 FEVQ99581 238 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 ZNF416Q9BWM5 594 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 NUAK2Q9H093 628 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 PDP1Q9P0J1 537 aaPredicted RBP14.43□□□□□ -0.1
SNCA-209ENST00000506244 POLR1DQ9Y2S0 133 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 CMAHPQ9Y471 501 aa14.43□□□□□ -0.1
SNCA-209ENST00000506244 F8P00451 2351 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 USF3Q68DE3 2245 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 SOX14O95416 240 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 IFNGP01579 166 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 ANXA8P13928 327 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 STOMP27105 288 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 THBS4P35443 961 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 GLRXP35754 106 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 GDI2P50395 445 aaKnown RBP14.42□□□□□ -0.1
SNCA-209ENST00000506244 LSM6P62312 80 aaKnown RBP14.42□□□□□ -0.1
SNCA-209ENST00000506244 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.42□□□□□ -0.1
SNCA-209ENST00000506244 ENDOGQ14249 297 aaKnown RBP14.42□□□□□ -0.1
SNCA-209ENST00000506244 KRTAP1-3Q8IUG1 177 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 LURAP1LQ8IV03 231 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 LNX2Q8N448 690 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 WFDC11Q8NEX6 87 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 SDR9C7Q8NEX9 313 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 SLCO4A1Q96BD0 722 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 NRBF2Q96F24 287 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 TSSK6Q9BXA6 273 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 PLA2G12AQ9BZM1 189 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 OR2H1Q9GZK4 316 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 RPRD1BQ9NQG5 326 aaKnown RBP14.42□□□□□ -0.1
SNCA-209ENST00000506244 ARMC1Q9NVT9 282 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 KIF17Q9P2E2 1029 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 KLHL21Q9UJP4 597 aa14.42□□□□□ -0.1
SNCA-209ENST00000506244 NDRG4Q9ULP0 352 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms