RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SLC22A9Q8IVM8 553 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 RIMKLAQ8IXN7 391 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF709Q8N972 641 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 FBXL13Q8NEE6 735 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 NOXO1Q8NFA2 376 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 OR10J6PQ8NGY7 276 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 KCNG3Q8TAE7 436 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SLC7A13Q8TCU3 470 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 TM4SF18Q96CE8 201 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 CCDC126Q96EE4 140 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF681Q96N22 645 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SPIN2AQ99865 258 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SPIN2BQ9BPZ2 258 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 GOLT1BQ9Y3E0 138 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 DOCK9Q9BZ29 2069 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 TUBGCP6Q96RT7 1819 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF705GA8MUZ8 300 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 H0Y8G0 127 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 CDC7O00311 574 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 PALMO75781 387 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 TSPAN13O95857 204 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 IGHV1-8P0DP01 117 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 NPY1RP25929 384 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 AQP2P41181 271 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 NSG1P42857 185 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 SULT1E1P49888 294 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 ATP5IP56385 69 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 ARG2P78540 354 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 MXD1Q05195 221 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 LY6EQ16553 131 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 RABL6Q3YEC7 729 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF684Q5T5D7 378 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 Q5W150 140 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 FBXW9Q5XUX1 488 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 PLET1Q6UQ28 207 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 SASS6Q6UVJ0 657 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 Q6ZSR3 168 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 UBALD2Q8IYN6 164 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 AKR7LQ8NHP1 331 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF502Q8TBZ5 544 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 SLC2A14Q8TDB8 520 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 KIFAP3Q92845 792 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 PKIBQ9C010 78 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 SYNDIG1Q9H7V2 258 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 SIRT7Q9NRC8 400 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNRD1Q9P1U0 126 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 UVRAGQ9P2Y5 699 aa2.27□□□□□ -2.05
TOPBP1-204ENST00000505804 BRWD3Q6RI45 1802 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 USP47Q96K76 1375 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 SYNJ2BP-COX16A0A087WUM0 186 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 GLYATL1P3A0A0U1RQE8 302 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 COLCA2A8K830 154 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 RAB29O14966 203 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 RP2O75695 350 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 CLPXO76031 633 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 IGHDP01880 384 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 CRYGBP07316 175 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 ANXA5P08758 320 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 UQCRFS1P1P0C7P4 283 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 RAB3BP20337 219 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 TMED10P49755 219 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 SLC25A11Q02978 314 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 PON2Q15165 354 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 PPP1R7Q15435 360 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 SHHQ15465 462 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 XKR4Q5GH76 650 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 PRMT9Q6P2P2 845 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 FBXW12Q6X9E4 464 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 FAM228AQ86W67 206 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 PRSS58Q8IYP2 241 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF615Q8N8J6 731 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 ZFP41Q8N8Y5 198 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 OR5B3Q8NH48 314 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 ABHD3Q8WU67 409 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 DUS3LQ96G46 650 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 CNDP1Q96KN2 507 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 SLC29A1Q99808 456 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 OR51M1Q9H341 326 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 UBE2ZQ9H832 354 aaPredicted RBP2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 HMG20AQ9NP66 347 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 SAMSN1Q9NSI8 373 aaKnown RBP2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 HPCAL4Q9UM19 191 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 TMED5Q9Y3A6 229 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 TMEM14AQ9Y6G1 99 aa2.26□□□□□ -2.05
TOPBP1-204ENST00000505804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 MAPK8IP3Q9UPT6 1336 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 IGLV1-50A0A075B6I6 118 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 SMCO2A6NFE2 343 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 LRRIQ3A6PVS8 624 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 RBFOX2O43251 390 aaKnown RBP eCLIP2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 VAMP5O95183 116 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 SERPINA5P05154 406 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 OR5H8P0DN80 308 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 CCNB1P14635 433 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 ZNF24P17028 368 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 TCN2P20062 427 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 GDI1P31150 447 aa2.25□□□□□ -2.05
TOPBP1-204ENST00000505804 NAA10P41227 235 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms