RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 LINC01560Q8TB33 94 aa8.78□□□□□ -1
NUP54-203ENST00000504173 BCL2L2Q92843 193 aaPredicted RBP8.78□□□□□ -1
NUP54-203ENST00000504173 OTULINQ96BN8 352 aa8.78□□□□□ -1
NUP54-203ENST00000504173 ZC3HAV1LQ96H79 300 aaKnown RBP8.78□□□□□ -1
NUP54-203ENST00000504173 RDH12Q96NR8 316 aa8.78□□□□□ -1
NUP54-203ENST00000504173 MUS81Q96NY9 551 aa8.78□□□□□ -1
NUP54-203ENST00000504173 TSSK2Q96PF2 358 aa8.78□□□□□ -1
NUP54-203ENST00000504173 MBOAT4Q96T53 435 aa8.78□□□□□ -1
NUP54-203ENST00000504173 NUAK2Q9H093 628 aa8.78□□□□□ -1
NUP54-203ENST00000504173 SEC61A2Q9H9S3 476 aa8.78□□□□□ -1
NUP54-203ENST00000504173 SRA1Q9HD15 236 aaKnown RBP8.78□□□□□ -1
NUP54-203ENST00000504173 SLC17A5Q9NRA2 495 aa8.78□□□□□ -1
NUP54-203ENST00000504173 SMPD3Q9NY59 655 aaPredicted RBP8.78□□□□□ -1
NUP54-203ENST00000504173 B9D1Q9UPM9 204 aa8.78□□□□□ -1
NUP54-203ENST00000504173 FKBP7Q9Y680 259 aa8.78□□□□□ -1
NUP54-203ENST00000504173 AKAP6Q13023 2319 aa8.78□□□□□ -1
NUP54-203ENST00000504173 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
NUP54-203ENST00000504173 A0A1W2PR80 420 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 SH3D21A4FU49 640 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 FAM183AA6NL82 134 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 PRR23D1E9PI22 279 aaPredicted RBP8.77□□□□□ -1.01
NUP54-203ENST00000504173 M0R129 80 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 DCTN6O00399 190 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 FARS2O95363 451 aaKnown RBP8.77□□□□□ -1.01
NUP54-203ENST00000504173 PRR23D2P0DMB1 279 aaPredicted RBP8.77□□□□□ -1.01
NUP54-203ENST00000504173 OR8G3PP0DMU2 310 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 NPR2P20594 1047 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 CDAP32320 146 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 PYCR1P32322 319 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 CAPZA2P47755 286 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 SLC25A1P53007 311 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 PPA1Q15181 289 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 TAB1Q15750 504 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 SGCAQ16586 387 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 ZNF362Q5T0B9 420 aaPredicted RBP8.77□□□□□ -1.01
NUP54-203ENST00000504173 C12orf73Q69YU5 71 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 PLBD1Q6P4A8 553 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 ZNF627Q7L945 461 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 P2RY8Q86VZ1 359 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 WFDC8Q8IUA0 241 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 GLB1L2Q8IW92 636 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 OR6V1Q8N148 313 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 ZNF555Q8NEP9 628 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 PROKR2Q8NFJ6 384 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 OR2T4Q8NH00 348 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 NRG4Q8WWG1 115 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 HSD17B8Q92506 261 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 NRGNQ92686 78 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 HTRA1Q92743 480 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 MUCL1Q96DR8 90 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 FOXN4Q96NZ1 517 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 WFIKKN1Q96NZ8 548 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 DDOQ99489 341 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 GRIP2Q9C0E4 1043 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 RACGAP1Q9H0H5 632 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 VCX3BQ9H321 246 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 NELFAQ9H3P2 528 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 MED20Q9H944 212 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 HINT3Q9NQE9 182 aaKnown RBP8.77□□□□□ -1.01
NUP54-203ENST00000504173 IMPAD1Q9NX62 359 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 COA3Q9Y2R0 106 aaPredicted RBP8.77□□□□□ -1.01
NUP54-203ENST00000504173 AMDHD2Q9Y303 409 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 UGT2A1Q9Y4X1 527 aa8.77□□□□□ -1.01
NUP54-203ENST00000504173 ARPC4-TTLL3A0A0A6YYG9 625 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 IGLV1-36A0A0B4J1U3 117 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 RNF212BA8MTL3 300 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CASKO14936 926 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 PRKYO43930 277 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 WNT11O96014 354 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 F12P00748 615 aaPredicted RBP8.76□□□□□ -1.01
NUP54-203ENST00000504173 HLA-DQA2P01906 255 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 GYPBP06028 91 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CLUP10909 449 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 HOXB1P14653 301 aaPredicted RBP8.76□□□□□ -1.01
NUP54-203ENST00000504173 MSR1P21757 451 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 LAP3P28838 519 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 GGT2P36268 569 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CDC42P60953 191 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 TUBA1BP68363 451 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 TUBA4AP68366 448 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 MRPS34P82930 218 aaKnown RBP8.76□□□□□ -1.01
NUP54-203ENST00000504173 GLO1Q04760 184 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 DBPQ10586 325 aaPredicted RBP8.76□□□□□ -1.01
NUP54-203ENST00000504173 NRN1LQ496H8 165 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 FOXL2NBQ6ZUU3 175 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 TUBA1AQ71U36 451 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 SSX8Q7RTT4 187 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.76□□□□□ -1.01
NUP54-203ENST00000504173 ZBTB46Q86UZ6 589 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CPOQ8IVL8 374 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CCDC36Q8IYA8 594 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 LRRC18Q8N456 261 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 SLC22A24Q8N4F4 322 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 TCEANCQ8N8B7 351 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 WDR31Q8NA23 367 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 OR51L1Q8NGJ5 315 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 FAM81AQ8TBF8 368 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 TMEM163Q8TC26 289 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 FAM222BQ8WU58 562 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 NABP1Q96AH0 204 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms