RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 PDGFAP04085 211 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SPARCP09486 303 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 CELP19835 753 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 KLK2P20151 261 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 DCTDP32321 178 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 UGT2B10P36537 528 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SELENOPP49908 381 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 RIDAP52758 137 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 OR12D2P58182 307 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SIRPAP78324 504 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 MRPS34P82930 218 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 FMODQ06828 376 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 EIF2B1Q14232 305 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 ETFDHQ16134 617 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SSX1Q16384 188 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 CTF1Q16619 201 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 CNPY1Q3B7I2 92 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 PLEKHN1Q494U1 663 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF684Q5T5D7 378 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 LIPKQ5VXJ0 399 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 LRFN4Q6PJG9 635 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 PAMR1Q6UXH9 720 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 USP43Q70EL4 1123 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 ATCAYQ86WG3 371 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 KLBQ86Z14 1044 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 YIPF7Q8N8F6 280 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 KBTBD8Q8NFY9 601 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 OR52N5Q8NH56 324 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 C11orf40Q8WZ69 217 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 PHYHIPQ92561 330 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 APH1AQ96BI3 265 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SMIM19Q96E16 107 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 OR8B4Q96RC9 309 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 TAAR6Q96RI8 345 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 TM9SF2Q99805 663 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 KCNN2Q9H2S1 579 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SLCO5A1Q9H2Y9 848 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 NIPAL2Q9H841 368 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 SEC61A2Q9H9S3 476 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 POLE4Q9NR33 117 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 MRPL22Q9NWU5 206 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 CLCF1Q9UBD9 225 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 CYB5R1Q9UHQ9 305 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 GNG8Q9UK08 70 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 IKZF2Q9UKS7 526 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 EMC9Q9Y3B6 208 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 NCKAP5O14513 1909 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 DNAJC13O75165 2243 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 IGKV1D-43A0A0B4J1Z2 117 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 A0A1B0GTH9 108 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 TRDV1A0A1B0GX56 115 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 CD8B2A6NJW9 211 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 C1QTNF9BB2RNN3 333 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF587BE7ETH6 402 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 RPL36A-HNRNPH2H7BZ11 118 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 OGG1O15527 345 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 SS18L1O75177 396 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 FARS2O95363 451 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 CNOT4O95628 575 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 APOC1P02654 83 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 CRHP06850 196 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 C1QTNF9P0C862 333 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 GADD45AP24522 165 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 FGF9P31371 208 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 SERPINB10P48595 397 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 PCBD1P61457 104 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 AQP6Q13520 282 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 CDK5R1Q15078 307 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF829Q3KNS6 432 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 FAM27BQ5VT28 67 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 NSUN5P2Q63ZY6 315 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 DMKNQ6E0U4 476 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 FDX2Q6P4F2 183 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 CD200R1LQ6Q8B3 271 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 LYPD4Q6UWN0 246 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC16A12Q6ZSM3 486 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 SSX6Q7RTT6 188 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 DCXRQ7Z4W1 244 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 KRT77Q7Z794 578 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 DPPA2Q7Z7J5 298 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 SYT9Q86SS6 491 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 TUSC5Q8IXB3 177 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF100Q8IYN0 542 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 TEX19Q8NA77 164 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 GJC3Q8NFK1 279 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 PELI1Q96FA3 418 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ZFP3Q96NJ6 502 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ABHD6Q9BV23 337 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 RBM24Q9BX46 236 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 COMMD4Q9H0A8 199 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ISG20L2Q9H9L3 353 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 UPB1Q9UBR1 384 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ING1Q9UK53 422 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ZMIZ1Q9ULJ6 1067 aa7.19□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF407Q9C0G0 2248 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 TRBV2A0A0J9YWF9 115 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 LOC100506127A0A0U1RQW1 187 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 TMEM212A6NML5 194 aa7.18□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF878C9JN71 531 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms