RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 A0A1W2PQ72 361 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 OR6C76A6NM76 312 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 SLC17A2O00624 439 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 RBBP9O75884 186 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 TPPPO94811 219 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 AHSA1O95433 338 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 FCER2P06734 321 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 VSIG10L2P0DP72 767 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 CPN1P15169 458 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 IFNGR1P15260 489 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 BCKDHBP21953 392 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 SNTA1Q13424 505 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 RAB11BQ15907 218 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 CLPPQ16740 277 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 C2orf76Q3KRA6 126 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 FAM166AQ6J272 317 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 CATSPERDQ86XM0 798 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 CARFQ8N187 725 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 SPICQ8N5J4 248 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 PCNPQ8WW12 178 aaKnown RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 ASB5Q8WWX0 329 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 FAM3DQ96BQ1 224 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 NUDT22Q9BRQ3 303 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 PHF7Q9BWX1 381 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 SEMA5BQ9P283 1151 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 COA3Q9Y2R0 106 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 ADAMTS9Q9P2N4 1935 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 PHF3Q92576 2039 aaKnown RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 LOC100289279A0A1B0GTE1 492 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 DOK2O60496 412 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 CREBL2O60519 120 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 CFDP00746 253 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 RIDAP52758 137 aaKnown RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 FBXW4P57775 412 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 SLC26A5P58743 744 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 TSPAN5P62079 268 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 RNF4P78317 190 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 FMODQ06828 376 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 PUDPQ08623 228 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 ESCO2Q56NI9 601 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 TMEM225Q6GV28 225 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 ELMOD2Q8IZ81 293 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 ASCC3Q8N3C0 2202 aaKnown RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 SLC25A45Q8N413 288 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 OR1J4Q8NGS1 313 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 OR52N5Q8NH56 324 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 STK35Q8TDR2 534 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 THAP3Q8WTV1 239 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 ARL5BQ96KC2 179 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 RBP7Q96R05 134 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 DUSP15Q9H1R2 295 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-204ENST00000501271 TAS2R4Q9NYW5 299 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 DHDHQ9UQ10 334 aa8.85□□□□□ -0.99
CLIP1-204ENST00000501271 RPS10-NUDT3A0A1W2PQS6 291 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 LINC00862A6NCI5 91 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 SOX1O00570 391 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 SRSF10O75494 262 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 IL5P05113 134 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GIMD1P0DJR0 217 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GLB1P16278 677 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 ENPP1P22413 925 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 MAP2K6P52564 334 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GLO1Q04760 184 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 IKZF1Q13422 519 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 SMAD4Q13485 552 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 POU4F3Q15319 338 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 RBMS2Q15434 407 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 KCTD18Q6PI47 426 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 NHLRC1Q6VVB1 395 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 PRSS42Q7Z5A4 293 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 APCDD1LQ8NCL9 501 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 THRSPQ92748 146 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 SLC25A28Q96A46 364 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 MED30Q96HR3 178 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GINS4Q9BRT9 223 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 PCED1AQ9H1Q7 454 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 DIABLOQ9NR28 239 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 CDV3Q9UKY7 258 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 AUP1Q9Y679 476 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 WDFY3Q8IZQ1 3526 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 SNRPGP15A8MWD9 76 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 MS4A18H0YCH9 400 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 MEN1O00255 615 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 OR2T1O43869 369 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 CSF1P09603 554 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GIPP09681 153 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 IGFBP3P17936 291 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 FAUP35544 74 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 PSMA6P60900 246 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GRK1Q15835 563 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 MS4A18Q3C1V0 323 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 SLC36A1Q7Z2H8 476 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 TMPRSS9Q7Z410 1059 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms