RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CUBNO60494 3623 aa10.05□□□□□ -0.8
NUDCD3-211ENST00000497978 IGHV1-69-2A0A0G2JMI3 117 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 ELOVL7A1L3X0 281 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 FAM157AC9JC47 383 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 CDC14BO60729 498 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 RP2O75695 350 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 IGHV3-13P01766 116 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 IFI30P13284 250 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 H2AFXP16104 143 aaPredicted RBP10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 ZNF32P17041 273 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 GDI2P50395 445 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 RPL27P61353 136 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 PCBD1P61457 104 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 SELENOWP63302 87 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 ZNF718Q3SXZ3 478 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 FAM205BPQ63HN1 556 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 C1orf174Q8IYL3 243 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 MICU2Q8IYU8 434 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 ALDH16A1Q8IZ83 802 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 TEX29Q8N6K0 151 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 CPEB3Q8NE35 698 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 HDAC2Q92769 488 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 LRRC37BQ96QE4 947 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 TSPAN32Q96QS1 320 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 FNDC11Q9BVV2 318 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 METTL17Q9H7H0 456 aaPredicted RBP10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 FGFR1OP2Q9NVK5 253 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 HIF3AQ9Y2N7 669 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 UGT2A1Q9Y4X1 527 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
NUDCD3-211ENST00000497978 A0A0A6YYJ9 748 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 TRAV20A0A0B4J274 112 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 PLSCR5A0PG75 271 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 C5orf49A4QMS7 147 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 A6NIZ1 184 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 WNT9BO14905 357 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 SLC22A2O15244 555 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 PIP5K1CO60331 668 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 IFNW1P05000 195 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ITGA2P17301 1181 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 CRYBB2P43320 205 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ZNF81P51508 661 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 CTXN1P60606 82 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 RAP1BP61224 184 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 LMO4P61968 165 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 RAP1AP62834 184 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ERVK-25P63136 954 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 MVKQ03426 396 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 GLO1Q04760 184 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 FMODQ06828 376 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 SF3A3Q12874 501 aaKnown RBP eCLIP10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 TSTQ16762 297 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 HFEQ30201 348 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ANKDD1AQ495B1 522 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 FAM209AQ5JX71 171 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 FAM27BQ5VT28 67 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ACSM5Q6NUN0 579 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 SLC25A47Q6Q0C1 308 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 USP51Q70EK9 711 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ARPINQ7Z6K5 226 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 AKR7LQ8NHP1 331 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 NABP1Q96AH0 204 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 NMD3Q96D46 503 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 RAB39BQ96DA2 213 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 TIMD4Q96H15 378 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 POM121L2Q96KW2 1035 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 ZNF665Q9H7R5 613 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 SAP30LQ9HAJ7 183 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 A4GNTQ9UNA3 340 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 TIMM10BQ9Y5J6 103 aa10.03□□□□□ -0.8
NUDCD3-211ENST00000497978 IGKV1D-43A0A0B4J1Z2 117 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 A0A1W2PPL8 197 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 EFCAB9A8MZ26 197 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 CLDN25C9JDP6 229 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 GSTA4O15217 222 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 IGHMP01871 453 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 CST2P09228 141 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 LIPAP38571 399 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 ARHGDIAP52565 204 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 PSG4Q00888 419 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 TRAM2Q15035 370 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 SPATA46Q5T0L3 261 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 AVPI1Q5T686 147 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 FAHD2BQ6P2I3 314 aaPredicted RBP10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 ARL9Q6T311 187 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 OAFQ86UD1 273 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 RNF113BQ8IZP6 322 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 OFCC1Q8IZS5 231 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 OR51A7Q8NH64 312 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 RAB1CQ92928 201 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 RCN3Q96D15 328 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 ELMOD3Q96FG2 381 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 FAHD2AQ96GK7 314 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 OR2H1Q9GZK4 316 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 NDEL1Q9GZM8 345 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 EGLN1Q9GZT9 426 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
NUDCD3-211ENST00000497978 ELOVL3Q9HB03 270 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms