RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 OR2L3Q8NG85 312 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 OR1L6Q8NGR2 347 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 FAM110BQ8TC76 370 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 UFD1Q92890 307 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 RBMXL1Q96E39 390 aaKnown RBP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 TSSK3Q96PN8 268 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 FMO2Q99518 471 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 FAM192AQ9GZU8 254 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 GIN1Q9NXP7 522 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 KLHL28Q9NXS3 571 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 PSMC3IPQ9P2W1 217 aaPredicted RBP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 SLC7A8Q9UHI5 535 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 TMCO1Q9UM00 188 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 MYO16Q9Y6X6 1858 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 PTPRTO14522 1441 aa1.4□□□□□ -2.18
VPS26A-208ENST00000497022 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.18
VPS26A-208ENST00000497022 CEMIPQ8WUJ3 1361 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 IGLV1-50A0A075B6I6 118 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CCDC182A6NF36 153 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 OR2AG2A6NM03 316 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 K7EM74 188 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CACNG3O60359 315 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CBR3O75828 277 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 OXSR1O95747 527 aaPredicted RBP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 TMEM50AO95807 157 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 ASGR1P07306 291 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 FGF4P08620 206 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 IGHV1-8P0DP01 117 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 ANXA8P13928 327 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 TNNI1P19237 187 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CHMLP26374 656 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 IL12AP29459 219 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 NCBP2P52298 156 aaKnown RBP eCLIP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 SLC7A9P82251 487 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 SCRN3Q0VDG4 424 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 OR5I1Q13606 314 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF77Q15935 545 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 XKR7Q5GH72 579 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 SPANXN2Q5MJ10 180 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 C1orf185Q5T7R7 199 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 HES5Q5TA89 166 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 ANXA8L1Q5VT79 327 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 NUDCD3Q8IVD9 361 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 ACOT4Q8N9L9 421 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 OR52H1Q8NGJ2 320 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 MCUR1Q96AQ8 359 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 PLEKHA8Q96JA3 519 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 IFT74Q96LB3 600 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 RNF157Q96PX1 679 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 PANX2Q96RD6 677 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CNN2Q99439 309 aaKnown RBP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CDX2Q99626 313 aaPredicted RBP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CHP1Q99653 195 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 ILKAPQ9H0C8 392 aaPredicted RBP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 PPA2Q9H2U2 334 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 EXO5Q9H790 373 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 NIPAL2Q9H841 368 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 C12orf10Q9HB07 376 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 LY9Q9HBG7 655 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 NEK6Q9HC98 313 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 MMP17Q9ULZ9 603 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 KCNIP3Q9Y2W7 256 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 STARD10Q9Y365 291 aa1.4□□□□□ -2.19
VPS26A-208ENST00000497022 CSDC2Q9Y534 153 aaKnown RBP1.4□□□□□ -2.19
VPS26A-208ENST00000497022 PLXNB1O43157 2135 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 IGHV5-10-1A0A0J9YXX1 117 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 LRRIQ4A6NIV6 560 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 C9JVG2 144 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 H0YIV9 168 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 WRBO00258 174 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 HSD17B6O14756 317 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 PSTPIP1O43586 416 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF207O43670 478 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CDH16O75309 829 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 SERPIND1P05546 499 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 KITLGP21583 273 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 FDFT1P37268 417 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 SYKP43405 635 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 YAP1P46937 504 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CYB561P49447 251 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ACLYP53396 1101 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CDH6P55285 790 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 RPS15P62841 145 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ERVK-25P63136 954 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 KCNJ2P63252 427 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF816Q0VGE8 651 aaPredicted RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ERCC8Q13216 396 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 PPIL2Q13356 520 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 SLC39A6Q13433 755 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 AQP6Q13520 282 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ARHGAP19Q14CB8 494 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 DGUOKQ16854 277 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 LRRC74BQ6ZQY2 392 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 SLC25A48Q6ZT89 311 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 STRADAQ7RTN6 431 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 PIANPQ8IYJ0 282 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 STPG2Q8N412 459 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms