RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 RAB40BQ12829 278 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 POU4F2Q12837 409 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 P2RY6Q15077 328 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 SGCAQ16586 387 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 ZNF813Q6ZN06 617 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 ERI1Q8IV48 349 aaKnown RBP16.04■□□□□ 0.16
RGP1-202ENST00000496906 ZNF433Q8N7K0 673 aaPredicted RBP16.04■□□□□ 0.16
RGP1-202ENST00000496906 OR1K1Q8NGR3 316 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 GGHQ92820 318 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 SIAEQ9HAT2 523 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 EMC7Q9NPA0 242 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 FKBP14Q9NWM8 211 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 SCN3BQ9NY72 215 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 CNOT2Q9NZN8 540 aaKnown RBP16.04■□□□□ 0.16
RGP1-202ENST00000496906 SLC5A6Q9Y289 635 aa16.04■□□□□ 0.16
RGP1-202ENST00000496906 LYZL6O75951 148 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 PSKH1P11801 424 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 PIPP12273 146 aaPredicted RBP16.03■□□□□ 0.16
RGP1-202ENST00000496906 ADAM8P78325 824 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 TGFBR3Q03167 851 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 SLC25A35Q3KQZ1 300 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 FAM27BQ5VT28 67 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 KLHL24Q6TFL4 600 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 SHFQ7M4L6 423 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.03■□□□□ 0.16
RGP1-202ENST00000496906 CXorf67Q86X51 503 aaPredicted RBP16.03■□□□□ 0.16
RGP1-202ENST00000496906 SLC22A24Q8N4F4 322 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 ZNF540Q8NDQ6 660 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 OR4F15Q8NGB8 312 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 YTHDF1Q9BYJ9 559 aaKnown RBP16.03■□□□□ 0.16
RGP1-202ENST00000496906 BLOC1S6Q9UL45 172 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 EXOGQ9Y2C4 368 aaKnown RBP16.03■□□□□ 0.16
RGP1-202ENST00000496906 TPRKBQ9Y3C4 175 aa16.03■□□□□ 0.16
RGP1-202ENST00000496906 EFCAB10A6NFE3 127 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 J3QRE1 110 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 ENTPD1P49961 510 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 CHN2P52757 468 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 LSM6P62312 80 aaKnown RBP16.02■□□□□ 0.16
RGP1-202ENST00000496906 SLC35A2P78381 396 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 PCK2Q16822 640 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 KLHL22Q53GT1 634 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 ANKRD16Q6P6B7 361 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 AHSA2Q719I0 299 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 SLC16A9Q7RTY1 509 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 C1orf162Q8NEQ5 155 aaPredicted RBP16.02■□□□□ 0.16
RGP1-202ENST00000496906 OR10H5Q8NGA6 315 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 OR52I1Q8NGK6 324 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 OR6N2Q8NGY6 317 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 ZNF416Q9BWM5 594 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 PAK1IP1Q9NWT1 392 aaPredicted RBP16.02■□□□□ 0.16
RGP1-202ENST00000496906 MYRFQ9Y2G1 1151 aa16.02■□□□□ 0.16
RGP1-202ENST00000496906 ZNF593O00488 134 aaPredicted RBP16.01■□□□□ 0.15
RGP1-202ENST00000496906 RAD51DO75771 328 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 OR8G3PP0DMU2 310 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 ZNF823P16415 610 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 ATP6V1E1P36543 226 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 RPS27P42677 84 aaKnown RBP16.01■□□□□ 0.15
RGP1-202ENST00000496906 ENDOGQ14249 297 aaKnown RBP16.01■□□□□ 0.15
RGP1-202ENST00000496906 TEX30Q5JUR7 227 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 SFRP5Q5T4F7 317 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 STAC2Q6ZMT1 411 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 LILRB4Q8NHJ6 448 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 SMAP2Q8WU79 429 aaPredicted RBP16.01■□□□□ 0.15
RGP1-202ENST00000496906 SGCDQ92629 289 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 BCL2L2Q92843 193 aaPredicted RBP16.01■□□□□ 0.15
RGP1-202ENST00000496906 BOD1Q96IK1 185 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 SH3GL3Q99963 347 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 DUSP21Q9H596 190 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 ELOVL5Q9NYP7 299 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 KCNG2Q9UJ96 466 aa16.01■□□□□ 0.15
RGP1-202ENST00000496906 DIDO1Q9BTC0 2240 aaKnown RBP16.01■□□□□ 0.15
RGP1-202ENST00000496906 A0A096LPE4 126 aa16■□□□□ 0.15
RGP1-202ENST00000496906 A0A1W2PPZ6 126 aa16■□□□□ 0.15
RGP1-202ENST00000496906 CIB4A0PJX0 185 aa16■□□□□ 0.15
RGP1-202ENST00000496906 IRGMA1A4Y4 181 aa16■□□□□ 0.15
RGP1-202ENST00000496906 PTGES3LE9PB15 166 aa16■□□□□ 0.15
RGP1-202ENST00000496906 FARS2O95363 451 aaKnown RBP16■□□□□ 0.15
RGP1-202ENST00000496906 FADS2O95864 444 aaKnown RBP16■□□□□ 0.15
RGP1-202ENST00000496906 PSMB1P20618 241 aaKnown RBP16■□□□□ 0.15
RGP1-202ENST00000496906 ASCL1P50553 236 aa16■□□□□ 0.15
RGP1-202ENST00000496906 ST3GAL4Q11206 333 aa16■□□□□ 0.15
RGP1-202ENST00000496906 CDSNQ15517 529 aa16■□□□□ 0.15
RGP1-202ENST00000496906 TSC22D1Q15714 1073 aa16■□□□□ 0.15
RGP1-202ENST00000496906 GABRA6Q16445 453 aa16■□□□□ 0.15
RGP1-202ENST00000496906 HIKESHIQ53FT3 197 aa16■□□□□ 0.15
RGP1-202ENST00000496906 DPY19L4Q7Z388 723 aa16■□□□□ 0.15
RGP1-202ENST00000496906 CDC20BQ86Y33 519 aa16■□□□□ 0.15
RGP1-202ENST00000496906 SLC35F2Q8IXU6 374 aa16■□□□□ 0.15
RGP1-202ENST00000496906 LRRC18Q8N456 261 aa16■□□□□ 0.15
RGP1-202ENST00000496906 IPCEF1Q8WWN9 437 aaPredicted RBP16■□□□□ 0.15
RGP1-202ENST00000496906 NR1H4Q96RI1 486 aaPredicted RBP16■□□□□ 0.15
RGP1-202ENST00000496906 COPS4Q9BT78 406 aa16■□□□□ 0.15
RGP1-202ENST00000496906 YIPF3Q9GZM5 350 aa16■□□□□ 0.15
RGP1-202ENST00000496906 FGF20Q9NP95 211 aaPredicted RBP16■□□□□ 0.15
RGP1-202ENST00000496906 GALNT8Q9NY28 637 aa16■□□□□ 0.15
RGP1-202ENST00000496906 CYB5R1Q9UHQ9 305 aa16■□□□□ 0.15
RGP1-202ENST00000496906 POLR1DQ9Y2S0 133 aa16■□□□□ 0.15
RGP1-202ENST00000496906 LHFPL6Q9Y693 200 aa16■□□□□ 0.15
RGP1-202ENST00000496906 FAM90A27PA6NNH2 459 aa16■□□□□ 0.15
RGP1-202ENST00000496906 ZG16O60844 167 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms