RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 POU3F1Q03052 451 aaPredicted RBP9.94□□□□□ -0.82
CMSS1-208ENST00000496116 FOXF1Q12946 379 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 RAB11BQ15907 218 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ST3GAL2Q16842 350 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 STPG1Q5TH74 334 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 GLT8D1Q68CQ7 371 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ANKRD16Q6P6B7 361 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SLC22A8Q8TCC7 542 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 RNF138Q8WVD3 245 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 MRGPRX4Q96LA9 322 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CCDC74BQ96LY2 380 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CMKLR1Q99788 373 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
CMSS1-208ENST00000496116 POTEKPQ9BYX7 375 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SLC17A5Q9NRA2 495 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SERINC1Q9NRX5 453 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 NKIRAS2Q9NYR9 191 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 TAS2R8Q9NYW2 309 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 MYOTQ9UBF9 498 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 B3GALT5Q9Y2C3 310 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 R4GMQ9 66 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ASCC3Q8N3C0 2202 aaKnown RBP9.93□□□□□ -0.82
CMSS1-208ENST00000496116 MYO15AQ9UKN7 3530 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 LY6G6EA0A0G2JKS1 128 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 H0YC42 278 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 H3BML4 177 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 ETV2O00321 342 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-208ENST00000496116 SLC17A2O00624 439 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 GMDSO60547 372 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 RBBP9O75884 186 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 TGM6O95932 706 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 POU3F4P49335 361 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 RPS15P62841 145 aaKnown RBP9.93□□□□□ -0.82
CMSS1-208ENST00000496116 FAM69BQ5VUD6 431 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 METTL11BQ5VVY1 283 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF385CQ66K41 422 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-208ENST00000496116 DEGS2Q6QHC5 323 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 TSSK4Q6SA08 328 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 GLB1L2Q8IW92 636 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 UBALD2Q8IYN6 164 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 SLC26A10Q8NG04 563 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 OR11G2Q8NGC1 345 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 OR51D1Q8NGF3 324 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 ASB5Q8WWX0 329 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 SPSB2Q99619 263 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 NPAS1Q99742 590 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 MESP1Q9BRJ9 268 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 SLC26A1Q9H2B4 701 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 METTL7AQ9H8H3 244 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 FANCFQ9NPI8 374 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 U3KQA8 63 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 FREM3P0C091 2139 aa9.93□□□□□ -0.82
CMSS1-208ENST00000496116 LOC100289279A0A1B0GTE1 492 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 GGT3PA6NGU5 568 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 YKT6O15498 198 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 CTAG2O75638 210 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 HRGP04196 525 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 ITGA5P08648 1049 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 CSRP1P21291 193 aaKnown RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 PTGS2P35354 604 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 MFGE8Q08431 387 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 HLA-BQ31612 363 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 SLC25A53Q5H9E4 307 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 TMEM225Q6GV28 225 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 LAMTOR1Q6IAA8 161 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 TMEM205Q6UW68 189 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 DNM1P46Q6ZS02 220 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF767PQ75MW2 155 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 DCXRQ7Z4W1 244 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 BPHLQ86WA6 291 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 BEST4Q8NFU0 473 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF431Q8TF32 576 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 FAM3DQ96BQ1 224 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 OR10A4Q9H209 315 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 HHLA2Q9UM44 414 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 WIF1Q9Y5W5 379 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 ADAMTS9Q9P2N4 1935 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 PI4KAP42356 2102 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 MEIKINA0A087WXM9 373 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 A0A1B0GUH1 482 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 LIPT2A6NK58 231 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 RAD1O60671 282 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 MPZL1O95297 269 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 CSF1P09603 554 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 TMIGD3P0DMS9 266 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 FOSL2P15408 326 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 CXCL3P19876 107 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 FSTP19883 344 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 HOXA6P31267 233 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 SNRPD2P62316 118 aaKnown RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 FMODQ06828 376 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 TOMM20Q15388 145 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 PCK2Q16822 640 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 C2orf76Q3KRA6 126 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 C6orf183Q5T699 404 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 LRFN4Q6PJG9 635 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms