RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 C5orf49A4QMS7 147 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 EDF1O60869 148 aaKnown RBP18.76■□□□□ 0.59
HDDC3-203ENST00000494993 IGHV1-46P01743 117 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 NR2C1P13056 603 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 MAKP20794 623 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 MPV17P39210 176 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 COMPP49747 757 aaPredicted RBP18.76■□□□□ 0.59
HDDC3-203ENST00000494993 MMP15P51511 669 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 LAPTM4AQ15012 233 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 THEM4Q5T1C6 240 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 METTL21CQ5VZV1 264 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 SLC25A47Q6Q0C1 308 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 UNQ6126/PRO20091Q6UXV3 157 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 C1QL2Q7Z5L3 287 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 OR8J3Q8NGG0 315 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 AKR7LQ8NHP1 331 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 NSMAFQ92636 917 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 PLA2G12AQ9BZM1 189 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 GMNCA6NCL1 334 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 HMGB1P1B2RPK0 211 aaPredicted RBP18.75■□□□□ 0.59
HDDC3-203ENST00000494993 TRIM77I1YAP6 450 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 J3QLI3 93 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 FXYD1O00168 92 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 SPRY3O43610 288 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 THRBP10828 461 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 OR1E2P47887 323 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 GDI2P50395 445 aaKnown RBP18.75■□□□□ 0.59
HDDC3-203ENST00000494993 ARFIP2P53365 341 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 ERVK-25P63136 954 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 PSG4Q00888 419 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 FAM27BQ5VT28 67 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 MBNL2Q5VZF2 373 aaKnown RBP18.75■□□□□ 0.59
HDDC3-203ENST00000494993 PEG10Q86TG7 708 aaKnown RBP18.75■□□□□ 0.59
HDDC3-203ENST00000494993 SLC25A40Q8TBP6 338 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 FAM216AQ8WUB2 273 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 LRRC58Q96CX6 371 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 HIF3AQ9Y2N7 669 aa18.75■□□□□ 0.59
HDDC3-203ENST00000494993 PLSCR5A0PG75 271 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 PIP5K1CO60331 668 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 TOP3AQ13472 1001 aaPredicted RBP18.74■□□□□ 0.59
HDDC3-203ENST00000494993 TAF11Q15544 211 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 ALG10Q5BKT4 473 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 DCAF12L2Q5VW00 463 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 ERICH5Q6P6B1 374 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 RFPL4BQ6ZWI9 263 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 KLF14Q8TD94 323 aaPredicted RBP18.74■□□□□ 0.59
HDDC3-203ENST00000494993 CCL17Q92583 94 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 JMJD8Q96S16 334 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 GAL3ST1Q99999 423 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 ALG12Q9BV10 488 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 RBM4Q9BWF3 364 aaKnown RBP18.74■□□□□ 0.59
HDDC3-203ENST00000494993 OR2J1Q9GZK6 312 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 WNT5BQ9H1J7 359 aa18.74■□□□□ 0.59
HDDC3-203ENST00000494993 TMEM89A2RUT3 159 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 ZSCAN5BA6NJL1 495 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 UBOX5O94941 541 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 IFNA14P01570 189 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 ADH4P08319 380 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 RPL27P61353 136 aaKnown RBP18.73■□□□□ 0.59
HDDC3-203ENST00000494993 C1orf174Q8IYL3 243 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 ZNF583Q96ND8 569 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 RBP7Q96R05 134 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 SUCNR1Q9BXA5 334 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 OR2H1Q9GZK4 316 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 EGLN1Q9GZT9 426 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 CYSLTR2Q9NS75 346 aa18.73■□□□□ 0.59
HDDC3-203ENST00000494993 H3BSA7 217 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 ICMTO60725 284 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 IGHMP01871 453 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 CST2P09228 141 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 ADRA2CP18825 462 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 GATA3P23771 443 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 LAP3P28838 519 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 LIPAP38571 399 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 PPP1CBP62140 327 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 SLC3A1Q07837 685 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 LRRC23Q53EV4 343 aaPredicted RBP18.72■□□□□ 0.59
HDDC3-203ENST00000494993 COQ5Q5HYK3 327 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 ALDH16A1Q8IZ83 802 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 CLDN22Q8N7P3 220 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 ABHD4Q8TB40 342 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 FNDC8Q8TC99 324 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 C10orf82Q8WW14 230 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 GCDHQ92947 438 aaPredicted RBP18.72■□□□□ 0.59
HDDC3-203ENST00000494993 TMEM120AQ9BXJ8 343 aa18.72■□□□□ 0.59
HDDC3-203ENST00000494993 CGGBP1Q9UFW8 167 aaPredicted RBP18.72■□□□□ 0.59
HDDC3-203ENST00000494993 HTR3EA5X5Y0 456 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 MRASO14807 208 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 NGFP01138 241 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 NPPAP01160 153 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 IFI30P13284 250 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 LIMS1P48059 325 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 CTXN1P60606 82 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 ST3GAL3Q11203 375 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 CYBRD1Q53TN4 286 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 FOXL2NBQ6ZUU3 175 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 ZNF771Q7L3S4 317 aaPredicted RBP18.71■□□□□ 0.59
HDDC3-203ENST00000494993 NANPQ8TBE9 248 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 BPIFA2Q96DR5 249 aa18.71■□□□□ 0.59
HDDC3-203ENST00000494993 PRRC1Q96M27 445 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms