RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 COMPP49747 757 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-208ENST00000494780 GDI2P50395 445 aaKnown RBP19.75■□□□□ 0.75
COL27A1-208ENST00000494780 FMODQ06828 376 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 CD47Q08722 323 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 LAPTM4AQ15012 233 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 THEM4Q5T1C6 240 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 SLC25A47Q6Q0C1 308 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 C1QL2Q7Z5L3 287 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 NSMAFQ92636 917 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 LRRC58Q96CX6 371 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 ALG12Q9BV10 488 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 TMPRSS13Q9BYE2 586 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 HIF3AQ9Y2N7 669 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 CACNG2Q9Y698 323 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 LOC100509620A0A075B734 347 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 PLSCR5A0PG75 271 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 HTR3EA5X5Y0 456 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 TRIM77I1YAP6 450 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 FXYD1O00168 92 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 NPPAP01160 153 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 IGHV1-46P01743 117 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 MPV17P39210 176 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 OR1E2P47887 323 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 MMP15P51511 669 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 ACTG1P63261 375 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 PSG4Q00888 419 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 ALG10Q5BKT4 473 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 COQ5Q5HYK3 327 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 SPATA46Q5T0L3 261 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 MBNL2Q5VZF2 373 aaKnown RBP19.74■□□□□ 0.75
COL27A1-208ENST00000494780 AKR7LQ8NHP1 331 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 FNDC8Q8TC99 324 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 FAM216AQ8WUB2 273 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 IPCEF1Q8WWN9 437 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-208ENST00000494780 RBP7Q96R05 134 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 JMJD8Q96S16 334 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 CYSLTR2Q9NS75 346 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 MRGBPQ9NV56 204 aa19.74■□□□□ 0.75
COL27A1-208ENST00000494780 SPRY3O43610 288 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 RGS9O75916 674 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-208ENST00000494780 ADH4P08319 380 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 MAKP20794 623 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 LIPAP38571 399 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 ARFIP2P53365 341 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 ERVK-25P63136 954 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 SLC3A1Q07837 685 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 ALDH16A1Q8IZ83 802 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 SLC25A40Q8TBP6 338 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 KLF14Q8TD94 323 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-208ENST00000494780 CCL17Q92583 94 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 ZNF583Q96ND8 569 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 OR2H1Q9GZK4 316 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 OR2J1Q9GZK6 312 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 EGLN1Q9GZT9 426 aa19.73■□□□□ 0.75
COL27A1-208ENST00000494780 CGGBP1Q9UFW8 167 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-208ENST00000494780 H3BSA7 217 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 ICMTO60725 284 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 CST2P09228 141 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 GATA3P23771 443 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 RPL27P61353 136 aaKnown RBP19.72■□□□□ 0.75
COL27A1-208ENST00000494780 ST3GAL3Q11203 375 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 TOP3AQ13472 1001 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-208ENST00000494780 TMEM255AQ5JRV8 349 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 DCAF12L2Q5VW00 463 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 PEG10Q86TG7 708 aaKnown RBP19.72■□□□□ 0.75
COL27A1-208ENST00000494780 RBM4Q9BWF3 364 aaKnown RBP19.72■□□□□ 0.75
COL27A1-208ENST00000494780 PLA2G12AQ9BZM1 189 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 WNT5BQ9H1J7 359 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 TIMM10BQ9Y5J6 103 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 TENM1Q9UKZ4 2725 aa19.72■□□□□ 0.75
COL27A1-208ENST00000494780 TMEM89A2RUT3 159 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 ZSCAN5BA6NJL1 495 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 PIP5K1CO60331 668 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 UBOX5O94941 541 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 IGHMP01871 453 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 LAP3P28838 519 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 IFNA8P32881 189 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 GUCA1AP43080 201 aaPredicted RBP19.71■□□□□ 0.75
COL27A1-208ENST00000494780 PCBD1P61457 104 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 PPP1CBP62140 327 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 CYBRD1Q53TN4 286 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 FAM205BPQ63HN1 556 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 RFPL4BQ6ZWI9 263 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 ABHD4Q8TB40 342 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 NANPQ8TBE9 248 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 C10orf82Q8WW14 230 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 BPIFA2Q96DR5 249 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 PRRC1Q96M27 445 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 DIRC2Q96SL1 478 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 GAL3ST1Q99999 423 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 SUCNR1Q9BXA5 334 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 TMEM120AQ9BXJ8 343 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 ELOVL3Q9HB03 270 aa19.71■□□□□ 0.75
COL27A1-208ENST00000494780 BBIP1A8MTZ0 92 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 MRASO14807 208 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 IFI30P13284 250 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 KDELR2P33947 212 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 LIMS1P48059 325 aa19.7■□□□□ 0.74
COL27A1-208ENST00000494780 LRRC23Q53EV4 343 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-208ENST00000494780 ZMAT1Q5H9K5 638 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms