RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 RABEP2Q9H5N1 569 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 NANOGQ9H9S0 305 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 SIAEQ9HAT2 523 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 CYSLTR2Q9NS75 346 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 STX18Q9P2W9 335 aaKnown RBP8.17□□□□□ -1.1
UBR4-216ENST00000494503 IGHV3OR16-10A0A075B7F0 116 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 TRBV5-3A0A0A0MS03 114 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 DNAJC9-AS1A6NH13 148 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 TMPRSS2O15393 492 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 ERLIN1O75477 346 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 OR7A10O76100 309 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 ABHD16AO95870 558 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MT-ND1P03886 318 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MMP7P09237 267 aaPredicted RBP8.16□□□□□ -1.1
UBR4-216ENST00000494503 NR2C1P13056 603 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 PCGF2P35227 344 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 RBMXP38159 391 aaKnown RBP8.16□□□□□ -1.1
UBR4-216ENST00000494503 WNT5AP41221 380 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 SLC18A1P54219 525 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 UGT2B15P54855 530 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 PCBP3P57721 371 aaKnown RBP8.16□□□□□ -1.1
UBR4-216ENST00000494503 NRN1LQ496H8 165 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 RUNDC3AQ59EK9 446 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 DOCK11Q5JSL3 2073 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 C1orf94Q6P1W5 598 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 ARL9Q6T311 187 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 DLEU7Q6UYE1 221 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 IGFN1Q86VF2 1251 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 SLC30A8Q8IWU4 369 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MICU2Q8IYU8 434 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 SPICQ8N5J4 248 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 OR2Z1Q8NG97 314 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MOSPD2Q8NHP6 518 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 RASSF5Q8WWW0 418 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 TAMM41Q96BW9 452 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 CGREF1Q99674 301 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MS4A7Q9GZW8 240 aaPredicted RBP8.16□□□□□ -1.1
UBR4-216ENST00000494503 TMBIM4Q9HC24 238 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MEPEQ9NQ76 525 aaPredicted RBP8.16□□□□□ -1.1
UBR4-216ENST00000494503 PURGQ9UJV8 347 aaKnown RBP8.16□□□□□ -1.1
UBR4-216ENST00000494503 RAB21Q9UL25 225 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 NPTNQ9Y639 398 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 AUP1Q9Y679 476 aa8.16□□□□□ -1.1
UBR4-216ENST00000494503 MEGF8Q7Z7M0 2845 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 LOC100509620A0A075B734 347 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 GMNCA6NCL1 334 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 UBOX5O94941 541 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 GPANK1O95872 356 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 GSTM3P21266 225 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 LAP3P28838 519 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 LIPAP38571 399 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 MRPL19P49406 292 aaKnown RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 MMP15P51511 669 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 MRPS34P82930 218 aaKnown RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 PSG4Q00888 419 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 LAPTM4AQ15012 233 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ESCO2Q56NI9 601 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ALG10Q5BKT4 473 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 MTX3Q5HYI7 312 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ZNF774Q6NX45 483 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 NKAIN4Q8IVV8 208 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 CLDN22Q8N7P3 220 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 TMEM239Q8WW34 195 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 HDAC2Q92769 488 aaKnown RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 SLC25A28Q96A46 364 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 TLCD1Q96CP7 247 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 MARS2Q96GW9 593 aaKnown RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 POM121L2Q96KW2 1035 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 RBP7Q96R05 134 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 DIRC2Q96SL1 478 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ZNF747Q9BV97 191 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 OR2H1Q9GZK4 316 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 UNKLQ9H9P5 680 aaKnown RBP8.15□□□□□ -1.1
UBR4-216ENST00000494503 ELOVL3Q9HB03 270 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 NPHS2Q9NP85 383 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 MMP26Q9NRE1 261 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 TNFRSF19Q9NS68 423 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 C20orf141Q9NUB4 165 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 TMEM106BQ9NUM4 274 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ZNF69Q9UC07 566 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 OR5V1Q9UGF6 321 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 EGFL7Q9UHF1 273 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 OPN4Q9UHM6 478 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 NUP50Q9UKX7 468 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 ZDHHC8Q9ULC8 765 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 MED31Q9Y3C7 131 aa8.15□□□□□ -1.1
UBR4-216ENST00000494503 IGKV1D-43A0A0B4J1Z2 117 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 H7C1C5 153 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 PIP5K1CO60331 668 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 LYPD3O95274 346 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 NGFP01138 241 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 IGHMP01871 453 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 HKR1P10072 659 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 IFI30P13284 250 aa8.14□□□□□ -1.11
UBR4-216ENST00000494503 TNFRSF1AP19438 455 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms