RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 C1QBP02746 253 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 SRP9P49458 86 aaKnown RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 LTC4SQ16873 150 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 DCXRQ7Z4W1 244 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 UBALD2Q8IYN6 164 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 RBMXL3Q8N7X1 1067 aaKnown RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 PXT1Q8NFP0 134 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 TXN2Q99757 166 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 C6orf106Q9H6K1 298 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 MOB1AQ9H8S9 216 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 CHRNA9Q9UGM1 479 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 ARPC4-TTLL3A0A0A6YYG9 625 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 KIR2DS1A0A191URI9 304 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF705FA8MVS1 300 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 TSPAN12O95859 305 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF705DP0CH99 300 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF705BP0CI00 300 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 KIR2DS4P43632 304 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 RUNX2Q13950 521 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 KIR2DS1Q14954 304 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 SYT13Q7L8C5 426 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 MORN4Q8NDC4 146 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 C11orf40Q8WZ69 217 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 SEC22CQ9BRL7 303 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 RTL8AQ9BWD3 113 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 OR52A5Q9H2C5 316 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 RAF1P04049 648 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 BSGP35613 385 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF687Q8N1G0 1237 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 PKMYT1Q99640 499 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 TMEM43Q9BTV4 400 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 ACOXLQ9NUZ1 547 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 TMEM200CA6NKL6 621 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 F6UZH7 168 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 SOWAHCQ53LP3 525 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-207ENST00000494090 Q6ZNB5 142 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 GDPD3Q7L5L3 318 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 KMT5CQ86Y97 462 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 OR5D18Q8NGL1 313 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
COL27A1-207ENST00000494090 SGCEO43556 437 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 FABP1P07148 127 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 SRFP11831 508 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 TCTN3Q6NUS6 607 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 PRSS45Q7RTY3 260 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 IFI44Q8TCB0 444 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 BTBD17A6NE02 478 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 LALBAP00709 142 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 MCCD1P59942 119 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-207ENST00000494090 SHHQ15465 462 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 LINC01599Q8WXQ3 324 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 BCO1Q9HAY6 547 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 CHST11Q9NPF2 352 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 PMPCAQ10713 525 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF266Q14584 549 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 PAQR6Q6TCH4 344 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 SEMA6DQ8NFY4 1073 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 LTB4R2Q9NPC1 389 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 LOXHD1Q8IVV2 1947 aa17.52■□□□□ 0.4
COL27A1-207ENST00000494090 TUSC2O75896 110 aa17.52■□□□□ 0.39
COL27A1-207ENST00000494090 CST9LP1Q5W188 147 aa17.52■□□□□ 0.39
COL27A1-207ENST00000494090 PLPP5Q8NEB5 264 aa17.52■□□□□ 0.39
COL27A1-207ENST00000494090 PRRT4C9JH25 899 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PRRG2O14669 202 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 CTXN2P0C2S0 81 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 LIPNQ5VXI9 398 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 OR2L13Q8N349 312 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PRSS35Q8N3Z0 413 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 AGAP14A8MT82 685 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 CLN5O75503 358 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 CLDN1O95832 211 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 BAHD1Q8TBE0 780 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 GPATCH2Q9NW75 528 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 COA3Q9Y2R0 106 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PMP2P02689 132 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 RPS2P15880 293 aaKnown RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 EBPQ15125 230 aaKnown RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 LGI3Q8N145 548 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PLEKHF2Q9H8W4 249 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 FKRPQ9H9S5 495 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 ZNF355PQ9NSJ1 428 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PIGLQ9Y2B2 252 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 CCDC163A0A0D9SF12 145 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 SOD1P00441 154 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PDGFAP04085 211 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 PPICP45877 212 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 CDC20Q12834 499 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 SELENBP1Q13228 472 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 GLIPR1L1Q6UWM5 242 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 H1FXQ92522 213 aaKnown RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 RBPMSQ93062 196 aaKnown RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 OPALINQ96PE5 141 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 ZNF385DQ9H6B1 395 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.51■□□□□ 0.391e-6■■□□□ 12
COL27A1-207ENST00000494090 A0A1B0GTL3 188 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 ZC3H12DA2A288 527 aaKnown RBP17.51■□□□□ 0.39
COL27A1-207ENST00000494090 EDDM3BP56851 147 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 SHEQ5VZ18 495 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 SSUH2Q9Y2M2 353 aa17.51■□□□□ 0.39
COL27A1-207ENST00000494090 NAA40Q86UY6 237 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms