RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 RFX3P48380 749 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 ACLYP53396 1101 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 TWF1Q12792 350 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 ERCC8Q13216 396 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 ZSCAN26Q16670 478 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 RABL6Q3YEC7 729 aaPredicted RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 ANKRD26P1Q6NSI1 321 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 FAM92BQ6ZTR7 304 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 NIPA1Q7RTP0 329 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 CDR2LQ86X02 465 aaPredicted RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 STPG2Q8N412 459 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 FAM86B1Q8N7N1 296 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 OR10G2Q8NGC3 310 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 OR1S2Q8NGQ3 325 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 OR4S2Q8NH73 311 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 LKAAEAR1Q8TD35 194 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 PLIN2Q99541 437 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 ATP5SQ99766 215 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 LSM7Q9UK45 103 aaKnown RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 ING4Q9UNL4 249 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 GOLT1BQ9Y3E0 138 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 CSDC2Q9Y534 153 aaKnown RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 EPRSP07814 1512 aaKnown RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 NCOA1Q15788 1441 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 IGHV5-51A0A0C4DH38 117 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 HEATR9A2RTY3 570 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 WBP4O75554 376 aaKnown RBP2.36□□□□□ -2.03
VTA1-204ENST00000491881 SNX4O95219 450 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 UTS2O95399 124 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CTDNEP1O95476 244 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 AIFM1O95831 613 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CLIC3O95833 236 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CT62P0C5K7 136 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 FOLR1P15328 257 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 ZNF24P17028 368 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 PGAM1P18669 254 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 MAS1LP35410 378 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 SSR4P51571 173 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CCNHP51946 323 aaPredicted RBP2.36□□□□□ -2.03
VTA1-204ENST00000491881 RAP1AP62834 184 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 POU2AF1Q16633 256 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 FAM83EQ2M2I3 478 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 VAX1Q5SQQ9 334 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CCNJQ5T5M9 372 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 ANKRD22Q5VYY1 191 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 NANOGP8Q6NSW7 305 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 NCCRP1Q6ZVX7 275 aaPredicted RBP2.36□□□□□ -2.03
VTA1-204ENST00000491881 HDDC2Q7Z4H3 204 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 H1FOOQ8IZA3 346 aaPredicted RBP2.36□□□□□ -2.03
VTA1-204ENST00000491881 PGAM4Q8N0Y7 254 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 TTC5Q8N0Z6 440 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 OR56B2PQ8NGI1 322 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 SLC7A13Q8TCU3 470 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 WFIKKN1Q96NZ8 548 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 OR2A5Q96R48 311 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 NDFIP1Q9BT67 221 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CWH43Q9H720 699 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 ISYNA1Q9NPH2 558 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 KCNJ16Q9NPI9 418 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 SAMSN1Q9NSI8 373 aaKnown RBP2.36□□□□□ -2.03
VTA1-204ENST00000491881 MRPS18BQ9Y676 258 aaKnown RBP2.36□□□□□ -2.03
VTA1-204ENST00000491881 TEX14Q8IWB6 1497 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 ADAMTS7Q9UKP4 1686 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CACNA1BQ00975 2339 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 CPS1P31327 1500 aa2.36□□□□□ -2.03
VTA1-204ENST00000491881 USP24Q9UPU5 2620 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 IGHV3-74A0A0B4J1X5 117 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 ZNF816-ZNF321PA0A0X1KG74 233 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 LRRIQ3A6PVS8 624 aaPredicted RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 H0YHG0 523 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 UBXN8O00124 270 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 AIM2O14862 343 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 B4GALT5O43286 388 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 WISP3O95389 354 aaPredicted RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 CRYGBP07316 175 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 GNAO1P09471 354 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 ZNF43P17038 809 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 IGFBP3P17936 291 aaPredicted RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 CDKN2BP42772 138 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 NAMPTP43490 491 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 TNNT2P45379 298 aaPredicted RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 MAB21L1Q13394 359 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 EIF4EBP1Q13541 118 aaPredicted RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 TEX43Q6ZNM6 134 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 CDH26Q8IXH8 852 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 ZNF502Q8TBZ5 544 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 CREB3L1Q96BA8 519 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 TM4SF18Q96CE8 201 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 RASD2Q96D21 266 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 PDXPQ96GD0 296 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 CNDP1Q96KN2 507 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 PKNOX2Q96KN3 472 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 SERPINB12Q96P63 405 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 CENPKQ9BS16 269 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 SLC25A2Q9BXI2 301 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 PARP12Q9H0J9 701 aaKnown RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 NECAP2Q9NVZ3 263 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 ZNF222Q9UK12 451 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 KIAA0586Q9BVV6 1533 aa2.35□□□□□ -2.03
VTA1-204ENST00000491881 NAV2Q8IVL1 2488 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms