RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SCG5P05408 212 aa19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 STK11Q15831 433 aa19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 OPN3Q9H1Y3 402 aaPredicted RBP19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 NELFAQ9H3P2 528 aa19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 POLE4Q9NR33 117 aa19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 TMEM38BQ9NVV0 291 aa19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 NCOA6Q14686 2063 aaPredicted RBP19.12■□□□□ 0.65
VCPKMT-204ENST00000491402 FASNP49327 2511 aaKnown RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 IRGMA1A4Y4 181 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 SEC14L2O76054 403 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 FADS2O95864 444 aaKnown RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 LYNP07948 512 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 GUCA1AP43080 201 aaPredicted RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 ADAM8P78325 824 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 MRPS34P82930 218 aaKnown RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 MVKQ03426 396 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 PIGFQ07326 219 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 C9orf135Q5VTT2 229 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 STX19Q8N4C7 294 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 ZNF610Q8N9Z0 462 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 SMAP2Q8WU79 429 aaPredicted RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 C11orf40Q8WZ69 217 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 MYDGFQ969H8 173 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 NABP1Q96AH0 204 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 CCNB1IP1Q9NPC3 277 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 ERRFI1Q9UJM3 462 aaPredicted RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 SLC5A6Q9Y289 635 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 USP9XQ93008 2570 aaPredicted RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 J3QRE1 110 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 ITGA5P08648 1049 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 ADRA2AP08913 450 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 B4GALT1P15291 398 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 MPGP29372 298 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 C21orf33P30042 268 aaPredicted RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 SLC16A9Q7RTY1 509 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 OR6N2Q8NGY6 317 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 FGF20Q9NP95 211 aaPredicted RBP19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 ERVK-18Q9QC07 812 aa19.11■□□□□ 0.65
VCPKMT-204ENST00000491402 RAB36O95755 333 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 CDK1P06493 297 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 HTR1AP08908 422 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 PSKH1P11801 424 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 NPR2P20594 1047 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 MSR1P21757 451 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 RPS27P42677 84 aaKnown RBP19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 ENTPD1P49961 510 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 CDH15P55291 814 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 SGCAQ16586 387 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 GABRG1Q8N1C3 465 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 CCDC120Q96HB5 630 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 TMEM80Q96HE8 168 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 SIGLEC11Q96RL6 698 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 EMC7Q9NPA0 242 aa19.1■□□□□ 0.65
VCPKMT-204ENST00000491402 CACNA1CQ13936 2221 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 ZNF593O00488 134 aaPredicted RBP19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 RGS10O43665 173 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 IGHA1P01876 353 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 ZNF823P16415 610 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 IGHV1-2P23083 117 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 DCKP27707 260 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 ARF1P84077 181 aaKnown RBP19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 KCNMB1Q16558 191 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 NRN1LQ496H8 165 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 ZNF627Q7L945 461 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 DPY19L4Q7Z388 723 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 LIX1LQ8IVB5 337 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 SLC35F2Q8IXU6 374 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 OR10H4Q8NGA5 316 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 PIGMQ9H3S5 423 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 SIAEQ9HAT2 523 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 TAS2R16Q9NYV7 291 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 DIMT1Q9UNQ2 313 aaKnown RBP19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 PCDHGB1Q9Y5G3 927 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 DVL2O14641 736 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 MSTNO14793 375 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 COX5AP20674 150 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 HCCSP53701 268 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 SH3BGRP55822 239 aaPredicted RBP19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 ZNF813Q6ZN06 617 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 BEND4Q6ZU67 534 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 PRSS48Q7RTY5 328 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 LUZP2Q86TE4 346 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 OR10H5Q8NGA6 315 aa19.09■□□□□ 0.65
VCPKMT-204ENST00000491402 MAGEA13PA6NCF6 341 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 C12orf71A8MTZ7 269 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 EEF1E1-BLOC1S5C9J1V9 151 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 EEF1E1O43324 174 aaKnown RBP19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 SPARCP09486 303 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 OR2T7P0C7T2 308 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 LSM6P62312 80 aaKnown RBP19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 ADORA2A-AS1P86434 159 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 PCK2Q16822 640 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 TEX30Q5JUR7 227 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 FAM27BQ5VT28 67 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 ZNF474Q6S9Z5 364 aaPredicted RBP19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 KLHL24Q6TFL4 600 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 LRRC18Q8N456 261 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 SLC22A24Q8N4F4 322 aa19.08■□□□□ 0.64
VCPKMT-204ENST00000491402 ACBD7Q8N6N7 88 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms