RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 RHCGQ9UBD6 479 aa11.63□□□□□ -0.55
COL6A3-211ENST00000491233 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
COL6A3-211ENST00000491233 SVEP1Q4LDE5 3571 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 LOC100509620A0A075B734 347 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 TRAV27A0A087WT01 109 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 IGHV1-69-2A0A0G2JMI3 117 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 A0A1W2PPL8 197 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 C5orf49A4QMS7 147 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 IGHV3-13P01766 116 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 MAKP20794 623 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 IFNA8P32881 189 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 MPV17P39210 176 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 CRYBB2P43320 205 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 GDI2P50395 445 aaKnown RBP11.62□□□□□ -0.55
COL6A3-211ENST00000491233 CTXN1P60606 82 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 RPL27P61353 136 aaKnown RBP11.62□□□□□ -0.55
COL6A3-211ENST00000491233 SELENOWP63302 87 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 PSG4Q00888 419 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 TEKQ02763 1124 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 TAF11Q15544 211 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 MOGQ16653 247 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 TSTQ16762 297 aaKnown RBP11.62□□□□□ -0.55
COL6A3-211ENST00000491233 TMEM255AQ5JRV8 349 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 USP51Q70EK9 711 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 VTCN1Q7Z7D3 282 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 NRMQ8IXM6 262 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 POU5F2Q8N7G0 328 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 LRRC75AQ8NAA5 344 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 OR13C2Q8NGS9 318 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 SLC25A40Q8TBP6 338 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 LZICQ8WZA0 190 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 OR2H1Q9GZK4 316 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 SAP30LQ9HAJ7 183 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 MAN2C1Q9NTJ4 1040 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 DECR2Q9NUI1 292 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 ARMCX1Q9P291 453 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 CACNG2Q9Y698 323 aa11.62□□□□□ -0.55
COL6A3-211ENST00000491233 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 HTR3EA5X5Y0 456 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 CLDN25C9JDP6 229 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 J3KTA2 159 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 IFNW1P05000 195 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 LAP3P28838 519 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 GCH1P30793 250 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 ZNF81P51508 661 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 TRAM2Q15035 370 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 ZNF718Q3SXZ3 478 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 THEM4Q5T1C6 240 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 FAM27BQ5VT28 67 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 FAM205BPQ63HN1 556 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 FOXL2NBQ6ZUU3 175 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 ARPINQ7Z6K5 226 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.61□□□□□ -0.55
COL6A3-211ENST00000491233 OR51A7Q8NH64 312 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 ABHD4Q8TB40 342 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 FNDC8Q8TC99 324 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 RAB39BQ96DA2 213 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 MARS2Q96GW9 593 aaKnown RBP11.61□□□□□ -0.55
COL6A3-211ENST00000491233 RBP7Q96R05 134 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 FNDC11Q9BVV2 318 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 OR2J1Q9GZK6 312 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 WNT5BQ9H1J7 359 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 ZNF665Q9H7R5 613 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 EIF3KQ9UBQ5 218 aaKnown RBP11.61□□□□□ -0.55
COL6A3-211ENST00000491233 WIPI2Q9Y4P8 454 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 SNX13Q9Y5W8 968 aa11.61□□□□□ -0.55
COL6A3-211ENST00000491233 A6NIZ1 184 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 ZSCAN5BA6NJL1 495 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 EFCAB9A8MZ26 197 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 H7C1C5 153 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 SPRY3O43610 288 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 VENTXO95231 258 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 ZNF682O95780 498 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 PNPP00491 289 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 CST2P09228 141 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 MMP15P51511 669 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 RAP1BP61224 184 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 PPP1CBP62140 327 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 LCN6P62502 163 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 RAP1AP62834 184 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 PRKCDQ05655 676 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 ENDOGQ14249 297 aaKnown RBP11.6□□□□□ -0.55
COL6A3-211ENST00000491233 HFEQ30201 348 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 FAM209AQ5JX71 171 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 ZNF774Q6NX45 483 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 UNQ6126/PRO20091Q6UXV3 157 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 KLF14Q8TD94 323 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-211ENST00000491233 GEMIN6Q8WXD5 167 aaKnown RBP11.6□□□□□ -0.55
COL6A3-211ENST00000491233 ELMOD3Q96FG2 381 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 ANK2Q01484 3957 aa11.6□□□□□ -0.55
COL6A3-211ENST00000491233 PLSCR5A0PG75 271 aa11.59□□□□□ -0.55
COL6A3-211ENST00000491233 CXCR6O00574 342 aa11.59□□□□□ -0.55
COL6A3-211ENST00000491233 FFAR1O14842 300 aa11.59□□□□□ -0.55
COL6A3-211ENST00000491233 SLC22A2O15244 555 aa11.59□□□□□ -0.55
COL6A3-211ENST00000491233 ICMTO60725 284 aa11.59□□□□□ -0.55
COL6A3-211ENST00000491233 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms