RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SHISA5Q8N114 240 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 BPIFB2Q8N4F0 458 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 OR13C8Q8NGS7 320 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 STOML3Q8TAV4 291 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 PIK3IP1Q96FE7 263 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF860A6NHJ4 632 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 NUDT19A8MXV4 375 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 C2CD4DB7Z1M9 353 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 FGF17O60258 216 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 CT62P0C5K7 136 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 COL9A1P20849 921 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 NFYBP25208 207 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 CTHP32929 405 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF627Q7L945 461 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 PRSS35Q8N3Z0 413 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 NT5CQ8TCD5 201 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 NKX3-1Q99801 234 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 UQCC1Q9NVA1 299 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 FARSAQ9Y285 508 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 KCNAB3O43448 404 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 SMIM6P0DI80 62 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 HLA-GP17693 338 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC25A1P53007 311 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 RPS4XP62701 263 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 OR7A5Q15622 319 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 EXD3Q8N9H8 876 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 OR6S1Q8NH40 331 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 TSEN15Q8WW01 171 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 LMF1Q96S06 567 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 HDAC8Q9BY41 377 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 LAMP5Q9UJQ1 280 aa17.48■□□□□ 0.39
SNAPC3-206ENST00000490969 TRAV20A0A0B4J274 112 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 TVP23AA6NH52 213 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF736B4DX44 427 aaPredicted RBP17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 GPR89AB7ZAQ6 455 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 P2RX6O15547 441 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 CYB5AP00167 134 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 GPR89BP0CG08 455 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 TPT1P13693 172 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 SNRPEP62304 92 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 DMWDQ09019 674 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 TOMM20Q15388 145 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 PRICKLE4Q2TBC4 344 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC16A13Q7RTY0 426 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 RNF141Q8WVD5 230 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC6A7Q99884 636 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 GAL3ST1Q99999 423 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 VSIG4Q9Y279 399 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 A0A087WUJ7 227 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 ELOA3DA6NLF2 546 aaPredicted RBP17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 F8VVB4 439 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 F8VWA3 439 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 NKX2-2O95096 273 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF28P17035 718 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 ZBTB25P24278 435 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 PRPS1P60891 318 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 FAM53BQ14153 422 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 ELOA3BQ3SY89 546 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 LYG2Q86SG7 212 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 TMEFF1Q8IYR6 380 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 ELOA3Q8NG57 546 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 GPX7Q96SL4 187 aaPredicted RBP17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 TIMM29Q9BSF4 260 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 SRA1Q9HD15 236 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 MMP26Q9NRE1 261 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 GSN-AS1Q9NRJ2 163 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
SNAPC3-206ENST00000490969 KNL1Q8NG31 2342 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 OR2T1O43869 369 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 CD74P04233 296 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 DCNP07585 359 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF806P0C7X5 589 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 SMIM10L1P0DMW3 83 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 CCKBRP32239 447 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 KIR3DL2P43630 455 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 RASGEF1BQ0VAM2 473 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 MGAT2Q10469 447 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 ALG11Q2TAA5 492 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF550Q7Z398 422 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC30A7Q8NEW0 376 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 SMIM10Q96HG1 83 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF251Q9BRH9 671 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 ACKR4Q9NPB9 350 aa17.46■□□□□ 0.39
SNAPC3-206ENST00000490969 CPED1A4D0V7 1026 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 DCTN6O00399 190 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 ZNF208O43345 1280 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 CSN2P05814 226 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 PGAM2P15259 253 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 PPP1R1AQ13522 171 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 HABP2Q14520 560 aaPredicted RBP17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 COL19A1Q14993 1142 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 FAM166AQ6J272 317 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 BAP18Q8IXM2 172 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 TMEM52Q8NDY8 209 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 OR4E2Q8NGC2 313 aa17.46■□□□□ 0.38
SNAPC3-206ENST00000490969 A0A1W2PQF6 199 aa17.45■□□□□ 0.38
SNAPC3-206ENST00000490969 BLOC1S5-TXNDC5H3BN57 136 aa17.45■□□□□ 0.38
SNAPC3-206ENST00000490969 AQP2P41181 271 aa17.45■□□□□ 0.38
SNAPC3-206ENST00000490969 RPS27P42677 84 aaKnown RBP17.45■□□□□ 0.38
SNAPC3-206ENST00000490969 RAB5BP61020 215 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms