RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TMPRSS11FQ6ZWK6 438 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 MED25Q71SY5 747 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 HSD17B13Q7Z5P4 300 aaPredicted RBP11.69□□□□□ -0.54
SHOX2-205ENST00000490689 FAM71E2Q8N5Q1 922 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 OR10AC1Q8NH08 325 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 MARCH1Q8TCQ1 289 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 PNPLA2Q96AD5 504 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 WDR77Q9BQA1 342 aaPredicted RBP11.69□□□□□ -0.54
SHOX2-205ENST00000490689 BANF2Q9H503 90 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 SIGLEC6O43699 453 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 KLF8O95600 359 aaPredicted RBP11.69□□□□□ -0.54
SHOX2-205ENST00000490689 IFNA17P01571 189 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 ZGLP1P0C6A0 271 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 DEFA6Q01524 100 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 ACY1Q03154 408 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
SHOX2-205ENST00000490689 PRSS41Q7RTY9 318 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 OR52H1Q8NGJ2 320 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 UBL7Q96S82 380 aaPredicted RBP11.69□□□□□ -0.54
SHOX2-205ENST00000490689 TIMM29Q9BSF4 260 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 SLCO1C1Q9NYB5 712 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 RHPN2P1A8MT19 583 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 NAT2P11245 290 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 OMGP23515 440 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 RAB13P51153 203 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 CLRN1P58418 232 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 HHEXQ03014 270 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 FJX1Q86VR8 437 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 CMBLQ96DG6 245 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 OR13C7P0DN81 318 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 PLA2G7Q13093 441 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 GNMTQ14749 295 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 NSDHLQ15738 373 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ATRAIDQ6UW56 229 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM151BQ8IW70 566 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 PGAM5Q96HS1 289 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 LMF2Q9BU23 707 aaKnown RBP11.68□□□□□ -0.54
SHOX2-205ENST00000490689 UBQLN4Q9NRR5 601 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 BCL2L11O43521 198 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TLX3O43711 291 aaPredicted RBP11.68□□□□□ -0.54
SHOX2-205ENST00000490689 NME2P1O60361 137 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ICAM2P13598 275 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 HRH1P35367 487 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TAS2R31P59538 309 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 IAH1Q2TAA2 248 aaPredicted RBP11.68□□□□□ -0.54
SHOX2-205ENST00000490689 C11orf87Q6NUJ2 197 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ADGRE4PQ86SQ3 457 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 NAXDQ8IW45 347 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 PBDC1Q9BVG4 233 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 A0A087WV62 115 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 POM121BA6NF01 834 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF264O43296 627 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TXNDC12O95881 172 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 JMJD7P0C870 316 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM225BP0DP42 221 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 NDUFA6P56556 154 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ZP1P60852 638 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 HERV-K104P61576 105 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TLE3Q04726 772 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ZP2Q05996 745 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 FUT5Q11128 374 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM244Q5VVB8 128 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 RCBTB1Q8NDN9 531 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 OR14A16Q8NHC5 309 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 FAM3CQ92520 227 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 TGIF2Q9GZN2 237 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 GREB1Q4ZG55 1949 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 F5H5K5 113 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 VSIG10L2P0DP72 767 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 NQO2P16083 231 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 GABRR1P24046 479 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
SHOX2-205ENST00000490689 MLC1Q15049 377 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 EIF2S3LQ2VIR3 472 aaKnown RBP11.68□□□□□ -0.54
SHOX2-205ENST00000490689 SLC35D3Q5M8T2 416 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 ELFN2Q5R3F8 820 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 WDR88Q6ZMY6 472 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 SGPP2Q8IWX5 399 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 OR5D14Q8NGL3 314 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 SDHAF3Q9NRP4 125 aa11.68□□□□□ -0.54
SHOX2-205ENST00000490689 MYO16Q9Y6X6 1858 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 OR5K3A6NET4 321 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 NSA2O95478 260 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 RPL18Q07020 188 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 DPTQ07507 201 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 ACSM1Q08AH1 577 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 SRSF5Q13243 272 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 USP53Q70EK8 1073 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 PGAP1Q75T13 922 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 ZAR1Q86SH2 424 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 ANGPTL5Q86XS5 388 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 MRPL43Q8N983 215 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 RAB3CQ96E17 227 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 FBXO7Q9Y3I1 522 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms