RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	TRIB1	Q96RU8	372 aa		16.02	■□□□□ 0.16
SRM-206	ENST00000490101	GLRX2	Q9NS18	164 aa		16.02	■□□□□ 0.16
SRM-206	ENST00000490101	PARPBP	Q9NWS1	579 aa		16.02	■□□□□ 0.16
SRM-206	ENST00000490101	GLTP	Q9NZD2	209 aa		16.02	■□□□□ 0.16
SRM-206	ENST00000490101	FOXD3	Q9UJU5	478 aa	Predicted RBP	16.02	■□□□□ 0.16
SRM-206	ENST00000490101	DIMT1	Q9UNQ2	313 aa	Known RBP	16.02	■□□□□ 0.16
SRM-206	ENST00000490101	ARHGAP21	Q5T5U3	1957 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101		J3QRE1	110 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SLC43A1	O75387	559 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	KHDRBS3	O75525	346 aa	Known RBP	16.01	■□□□□ 0.15
SRM-206	ENST00000490101	MT-ND2	P03891	347 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SBK2	P0C263	348 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	DCK	P27707	260 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SELENOP	P49908	381 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	RNLS	Q5VYX0	342 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	CARD17	Q5XLA6	110 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	NSUN5P2	Q63ZY6	315 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	TMEM154	Q6P9G4	183 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	LRFN4	Q6PJG9	635 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SLC25A47	Q6Q0C1	308 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	B3GLCT	Q6Y288	498 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	P4HA3	Q7Z4N8	544 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SPART	Q8N0X7	666 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	POMGNT2	Q8NAT1	580 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	OR6N1	Q8NGY5	312 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	JAM3	Q9BX67	310 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	CDCA4	Q9BXL8	241 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	MARCH7	Q9H992	704 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	NOSIP	Q9Y314	301 aa	Known RBP	16.01	■□□□□ 0.15
SRM-206	ENST00000490101	PCDHGB1	Q9Y5G3	927 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SNX5	Q9Y5X3	404 aa		16.01	■□□□□ 0.15
SRM-206	ENST00000490101	SS18L1	O75177	396 aa	Predicted RBP	16	■□□□□ 0.15
SRM-206	ENST00000490101	RAB36	O95755	333 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	IGHA1	P01876	353 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	BMP5	P22003	454 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	C21orf33	P30042	268 aa	Predicted RBP	16	■□□□□ 0.15
SRM-206	ENST00000490101	ATP6V1E1	P36543	226 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	MVK	Q03426	396 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	FMOD	Q06828	376 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	IRF3	Q14653	427 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	SEM1	Q6ZVN7	128 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	TUSC5	Q8IXB3	177 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	SVOP	Q8N4V2	548 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	OR4F15	Q8NGB8	312 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	OR51G2	Q8NGK0	314 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	OR6K6	Q8NGW6	343 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	MCHR2	Q969V1	340 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	GMPPA	Q96IJ6	420 aa	Predicted RBP	16	■□□□□ 0.15
SRM-206	ENST00000490101	CCDC90B	Q9GZT6	254 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	RERGL	Q9H628	205 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	ADGRL4	Q9HBW9	690 aa		16	■□□□□ 0.15
SRM-206	ENST00000490101	IGKV1D-43	A0A0B4J1Z2	117 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	OR6C65	A6NJZ3	312 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	HSPB2	A8KAH6	182 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	FAM171A2	A8MVW0	826 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	MRPL33	O75394	65 aa	Known RBP	15.99	■□□□□ 0.15
SRM-206	ENST00000490101	APOL3	O95236	402 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	CLPTM1	O96005	669 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	ADRA2A	P08913	450 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	QDPR	P09417	244 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	ATP6V1B1	P15313	513 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	KIR2DL3	P43628	341 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	GLO1	Q04760	184 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	BLMH	Q13867	455 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	GUSBP1	Q15486	140 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	HSPB2	Q16082	182 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	ETFDH	Q16134	617 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	C10orf128	Q5T292	105 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	OR2A2	Q6IF42	318 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	TIGD4	Q8IY51	512 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	ZNF511	Q8NB15	262 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	RELL2	Q8NC24	303 aa	Predicted RBP	15.99	■□□□□ 0.15
SRM-206	ENST00000490101	NAXE	Q8NCW5	288 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	CNN2	Q99439	309 aa	Known RBP	15.99	■□□□□ 0.15
SRM-206	ENST00000490101	TM9SF2	Q99805	663 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	LINC00470	Q9BZP3	86 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	CLEC4A	Q9UMR7	237 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	COA3	Q9Y2R0	106 aa	Predicted RBP	15.99	■□□□□ 0.15
SRM-206	ENST00000490101	EXOSC1	Q9Y3B2	195 aa	Known RBP	15.99	■□□□□ 0.15
SRM-206	ENST00000490101	COMMD3-BMI1	R4GMX3	469 aa		15.99	■□□□□ 0.15
SRM-206	ENST00000490101	NIPBL	Q6KC79	2804 aa	eCLIP	15.98	■□□□□ 0.15
SRM-206	ENST00000490101	MBD3L4	A6NDZ8	208 aa	Predicted RBP	15.98	■□□□□ 0.15
SRM-206	ENST00000490101	MBD3L3	A6NE82	208 aa	Predicted RBP	15.98	■□□□□ 0.15
SRM-206	ENST00000490101	MBD3L5	A6NJ08	208 aa	Predicted RBP	15.98	■□□□□ 0.15
SRM-206	ENST00000490101	DVL2	O14641	736 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	AGTR1	P30556	359 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	PHYHD1	Q5SRE7	291 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	SHF	Q7M4L6	423 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	SLC16A9	Q7RTY1	509 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	GLB1L2	Q8IW92	636 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	ACBD7	Q8N6N7	88 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	SLC26A10	Q8NG04	563 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	15.98	■□□□□ 0.15
SRM-206	ENST00000490101	B3GAT2	Q9NPZ5	323 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	INPP5E	Q9NRR6	644 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	CRIM1	Q9NZV1	1036 aa		15.98	■□□□□ 0.15
SRM-206	ENST00000490101	DHH	O43323	396 aa		15.97	■□□□□ 0.15
SRM-206	ENST00000490101	CTAG2	O75638	210 aa		15.97	■□□□□ 0.15
SRM-206	ENST00000490101	TF	P02787	698 aa		15.97	■□□□□ 0.15
SRM-206	ENST00000490101	HRG	P04196	525 aa		15.97	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms