RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 DVL3Q92997 716 aaPredicted RBP13.44□□□□□ -0.26
PLOD3-216ENST00000489927 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
PLOD3-216ENST00000489927 OR2J1Q9GZK6 312 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 EGLN1Q9GZT9 426 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 RABEP2Q9H5N1 569 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 NANOGQ9H9S0 305 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 NTN4Q9HB63 628 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 INIPQ9NRY2 104 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 C20orf141Q9NUB4 165 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
PLOD3-216ENST00000489927 EIF3KQ9UBQ5 218 aaKnown RBP13.44□□□□□ -0.26
PLOD3-216ENST00000489927 PPIAL4AQ9Y536 164 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 PCDHGB1Q9Y5G3 927 aa13.44□□□□□ -0.26
PLOD3-216ENST00000489927 ANGPT2O15123 496 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 OR7A10O76100 309 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 ZFP36P26651 326 aaKnown RBP13.43□□□□□ -0.26
PLOD3-216ENST00000489927 GDI2P50395 445 aaKnown RBP13.43□□□□□ -0.26
PLOD3-216ENST00000489927 ERVK-25P63136 954 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 PSG4Q00888 419 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 SLC3A1Q07837 685 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 SGCAQ16586 387 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 PRR31Q5SQ13 230 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 RFPL4BQ6ZWI9 263 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 TREML1Q86YW5 311 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 ABHD4Q8TB40 342 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 ST7LQ8TDW4 575 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 TMEM255BQ8WV15 326 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 HDAC2Q92769 488 aaKnown RBP13.43□□□□□ -0.26
PLOD3-216ENST00000489927 SMURF2Q9HAU4 748 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 CYSLTR2Q9NS75 346 aa13.43□□□□□ -0.26
PLOD3-216ENST00000489927 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 TMPRSS2O15393 492 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 NGFP01138 241 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 ADH4P08319 380 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
PLOD3-216ENST00000489927 TSPAN19P0C672 248 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 TNFRSF1BP20333 461 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 RBMXP38159 391 aaKnown RBP13.42□□□□□ -0.26
PLOD3-216ENST00000489927 RBM34P42696 430 aaKnown RBP13.42□□□□□ -0.26
PLOD3-216ENST00000489927 CD47Q08722 323 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 INTS11Q5TA45 600 aaKnown RBP13.42□□□□□ -0.26
PLOD3-216ENST00000489927 FAM27BQ5VT28 67 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 UNQ6126/PRO20091Q6UXV3 157 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 DEFB108BQ8NET1 73 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 OR10A6Q8NH74 314 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 RASSF5Q8WWW0 418 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 SGTBQ96EQ0 304 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 ZNF747Q9BV97 191 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 OR2H1Q9GZK4 316 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 MSL2Q9HCI7 577 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 NPHS2Q9NP85 383 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 MMP26Q9NRE1 261 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 DCAF16Q9NXF7 216 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 STX18Q9P2W9 335 aaKnown RBP13.42□□□□□ -0.26
PLOD3-216ENST00000489927 KLHL21Q9UJP4 597 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 ZDHHC8Q9ULC8 765 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 SH3GLB1Q9Y371 365 aa13.42□□□□□ -0.26
PLOD3-216ENST00000489927 FOXH1O75593 365 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 HKR1P10072 659 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 LAP3P28838 519 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 LIPAP38571 399 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 GZMMP51124 257 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 TAS2R41P59536 307 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 PPP1CBP62140 327 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 PIN1Q13526 163 aaPredicted RBP13.41□□□□□ -0.26
PLOD3-216ENST00000489927 NFYCQ13952 458 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 LAPTM4AQ15012 233 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 VMACQ2NL98 169 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 TUSC1Q2TAM9 212 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 SLC25A47Q6Q0C1 308 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 RBMS3Q6XE24 437 aaKnown RBP13.41□□□□□ -0.26
PLOD3-216ENST00000489927 CCDC80Q76M96 950 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 CLDN22Q8N7P3 220 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 TMEM239Q8WW34 195 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 LIPHQ8WWY8 451 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 C1QTNF5Q9BXJ0 243 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 WNT5BQ9H1J7 359 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 CGGBP1Q9UFW8 167 aaPredicted RBP13.41□□□□□ -0.26
PLOD3-216ENST00000489927 PURGQ9UJV8 347 aaKnown RBP13.41□□□□□ -0.26
PLOD3-216ENST00000489927 NPTNQ9Y639 398 aa13.41□□□□□ -0.26
PLOD3-216ENST00000489927 NPIPB13A6NJU9 1138 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 NPIPB4C9JG80 1138 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 ICMTO60725 284 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 SHOX2O60902 331 aaPredicted RBP13.4□□□□□ -0.26
PLOD3-216ENST00000489927 OR5F1O95221 314 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 IGF2P01344 180 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 IGHV2-70P01814 119 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 CD55P08174 381 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 SBK2P0C263 348 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 FOXL1Q12952 345 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 TOP3AQ13472 1001 aaPredicted RBP13.4□□□□□ -0.26
PLOD3-216ENST00000489927 BEND6Q5SZJ8 279 aaPredicted RBP13.4□□□□□ -0.26
PLOD3-216ENST00000489927 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 C1orf174Q8IYL3 243 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 ALDH16A1Q8IZ83 802 aa13.4□□□□□ -0.26
PLOD3-216ENST00000489927 POP5Q969H6 163 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms