RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 PABPC1L2AQ5JQF8 200 aa16.49■□□□□ 0.23
EPHB4-207ENST00000489808 PAQR4Q8N4S7 273 aaPredicted RBP16.49■□□□□ 0.23
EPHB4-207ENST00000489808 LINC00471Q8N535 108 aa16.49■□□□□ 0.23
EPHB4-207ENST00000489808 CPEB3Q8NE35 698 aaKnown RBP16.49■□□□□ 0.23
EPHB4-207ENST00000489808 OR1J2Q8NGS2 313 aa16.49■□□□□ 0.23
EPHB4-207ENST00000489808 POLE4Q9NR33 117 aa16.49■□□□□ 0.23
EPHB4-207ENST00000489808 VSX1Q9NZR4 365 aaPredicted RBP16.49■□□□□ 0.23
EPHB4-207ENST00000489808 SLC7A8Q9UHI5 535 aa16.49■□□□□ 0.23
EPHB4-207ENST00000489808 TIMM10BQ9Y5J6 103 aa16.49■□□□□ 0.23
EPHB4-207ENST00000489808 A0A1W2PPL8 197 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 AQP12BA6NM10 295 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 FAM171A2A8MVW0 826 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 SOCS2O14508 198 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 ARPC3O15145 178 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 GPRIN2O60269 458 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 PPP1R3DO95685 299 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 RAP2AP10114 183 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 CTLA4P16410 223 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 MSR1P21757 451 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 APEX1P27695 318 aaKnown RBP16.48■□□□□ 0.23
EPHB4-207ENST00000489808 SLC6A6P31641 620 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 EVX1P49640 407 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 DSCR9P59020 149 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 PPP1R8Q12972 351 aaKnown RBP16.48■□□□□ 0.23
EPHB4-207ENST00000489808 BNIP1Q12981 228 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 TBC1D28Q2M2D7 210 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 OR2T5Q6IEZ7 315 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 ZNF770Q6IQ21 691 aaPredicted RBP16.48■□□□□ 0.23
EPHB4-207ENST00000489808 PTCHD4Q6ZW05 846 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 ADCK1Q86TW2 530 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 AQP12AQ8IXF9 295 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 SVOPLQ8N434 492 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 OR10H5Q8NGA6 315 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 OR2T29Q8NH02 315 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 FANK1Q8TC84 345 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 MRPL24Q96A35 216 aaKnown RBP16.48■□□□□ 0.23
EPHB4-207ENST00000489808 SAMD8Q96LT4 415 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 ERMAPQ96PL5 475 aaPredicted RBP16.48■□□□□ 0.23
EPHB4-207ENST00000489808 VRK1Q99986 396 aaPredicted RBP16.48■□□□□ 0.23
EPHB4-207ENST00000489808 RHNO1Q9BSD3 238 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 CHID1Q9BWS9 393 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 REG4Q9BYZ8 158 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 SYT4Q9H2B2 425 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 LRMDAQ9H2I8 198 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 CDH20Q9HBT6 801 aa16.48■□□□□ 0.23
EPHB4-207ENST00000489808 RNF223E7ERA6 249 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 SLC16A7O60669 478 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 KHDRBS3O75525 346 aaKnown RBP16.47■□□□□ 0.23
EPHB4-207ENST00000489808 CCNB2O95067 398 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 SNAP29O95721 258 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 GASTP01350 101 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 STOMP27105 288 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 APLNRP35414 380 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 PPOXP50336 477 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 PCBD1P61457 104 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 RPS23P62266 143 aaKnown RBP16.47■□□□□ 0.23
EPHB4-207ENST00000489808 ENDOGQ14249 297 aaKnown RBP16.47■□□□□ 0.23
EPHB4-207ENST00000489808 UGT2A3Q6UWM9 527 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 CLEC9AQ6UXN8 241 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 SYT9Q86SS6 491 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 ADGRG5Q8IZF4 528 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 OR9Q2Q8NGE9 314 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 AKR7LQ8NHP1 331 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 SORCS2Q96PQ0 1159 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 ZNF416Q9BWM5 594 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 MRPL37Q9BZE1 423 aaKnown RBP16.47■□□□□ 0.23
EPHB4-207ENST00000489808 OR2H1Q9GZK4 316 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 WNT5BQ9H1J7 359 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 VNN3Q9NY84 501 aa16.47■□□□□ 0.23
EPHB4-207ENST00000489808 COA3Q9Y2R0 106 aaPredicted RBP16.47■□□□□ 0.23
EPHB4-207ENST00000489808 ZFHX3Q15911 3703 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 C12orf71A8MTZ7 269 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 GSC2O15499 205 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 IDH3BO43837 385 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 DNAJC8O75937 253 aaPredicted RBP16.46■□□□□ 0.23
EPHB4-207ENST00000489808 LY6G6DO95868 133 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 PCSK6P29122 969 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 UCP2P55851 309 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 CLEC2AQ6UVW9 174 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 ZNF620Q6ZNG0 422 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 GLB1L2Q8IW92 636 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 ALDH16A1Q8IZ83 802 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 ZNF525Q8N782 197 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 CANT1Q8WVQ1 401 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 POM121L2Q96KW2 1035 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 FOXN4Q96NZ1 517 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 WACQ9BTA9 647 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 IFT27Q9BW83 186 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 NUAK2Q9H093 628 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 RAB1BQ9H0U4 201 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 REEP1Q9H902 201 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 EMC7Q9NPA0 242 aa16.46■□□□□ 0.23
EPHB4-207ENST00000489808 SAMHD1Q9Y3Z3 626 aaKnown RBP16.46■□□□□ 0.23
EPHB4-207ENST00000489808 LOC100509620A0A075B734 347 aa16.45■□□□□ 0.22
EPHB4-207ENST00000489808 IGHV4-30-2A0A087WSY4 118 aa16.45■□□□□ 0.22
EPHB4-207ENST00000489808 LY6HO94772 140 aa16.45■□□□□ 0.22
EPHB4-207ENST00000489808 IGFBP1P08833 259 aaPredicted RBP16.45■□□□□ 0.22
EPHB4-207ENST00000489808 FAM157BP0CG42 384 aa16.45■□□□□ 0.22
EPHB4-207ENST00000489808 HIST1H1CP16403 213 aaKnown RBP16.45■□□□□ 0.22
EPHB4-207ENST00000489808 CCNOP22674 350 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms