RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PARP16Q8N5Y8 322 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF676Q8N7Q3 588 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 EXD3Q8N9H8 876 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 WDSUB1Q8N9V3 476 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 C19orf18Q8NEA5 215 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR6N2Q8NGY6 317 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR2AJ1Q8NGZ0 328 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 RPS4Y2Q8TD47 263 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 THEM6Q8WUY1 208 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 RAB40AQ8WXH6 277 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ASB10Q8WXI3 467 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ZCCHC14Q8WYQ9 949 aaKnown RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 FOXRED1Q96CU9 486 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 NTNG2Q96CW9 530 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 BBC3Q96PG8 261 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR5B2Q96R09 309 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR8B4Q96RC9 309 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TBX5Q99593 518 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TM9SF2Q99805 663 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 FAM173AQ9BQD7 235 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 UTP23Q9BRU9 249 aaKnown RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 HCAR1Q9BXC0 346 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 HDHD5Q9BXW7 423 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TPK1Q9H3S4 243 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 GALNT9Q9HCQ5 603 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TCF7L1Q9HCS4 588 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 FAIMQ9NVQ4 179 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 STMN3Q9NZ72 180 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 FBXL4Q9UKA2 621 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 RCE1Q9Y256 329 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 VDAC3Q9Y277 283 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 KLF13Q9Y2Y9 288 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ETV7Q9Y603 341 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ADAMTS20P59510 1910 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 URB1O60287 2271 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 IGSF10Q6WRI0 2623 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ATRXP46100 2492 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 CENPXA8MT69 81 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 MS4A18H0YCH9 400 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF593O00488 134 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 SULT1B1O43704 296 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 SCGNO76038 276 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 APOL3O95236 402 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 TFP02787 698 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 GYPBP06028 91 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ERCC1P07992 297 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 UBCP0CG48 685 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 CALCBP10092 127 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 PRKAR1AP10644 381 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 IFNGR1P15260 489 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 SRMP19623 302 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 NPR2P20594 1047 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 PTNP21246 168 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 EPHA1P21709 976 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 LAP3P28838 519 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 DLSTP36957 453 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 NAA10P41227 235 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 EVX1P49640 407 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF84P51523 738 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 AGFG1P52594 562 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 AP3S2P59780 193 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 LSM6P62312 80 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 GRB2P62993 217 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ECH1Q13011 328 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 SLC17A1Q14916 467 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 TOMM20Q15388 145 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 KCNMB1Q16558 191 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 MS4A18Q3C1V0 323 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 TMEM176BQ3YBM2 270 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 TP53I3Q53FA7 332 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 DCAF10Q5QP82 559 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF684Q5T5D7 378 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 HES3Q5TGS1 186 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 RAET1LQ5VY80 246 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 TRIQKQ629K1 86 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 FCRLBQ6BAA4 426 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ALKBH2Q6NS38 261 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ARSKQ6UWY0 536 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 FAM131AQ6UXB0 335 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 PM20D2Q8IYS1 436 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 CENPSQ8N2Z9 138 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 OR52N5Q8NH56 324 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 RNF128Q8TEB7 428 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 CPNE4Q96A23 557 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 CPNE2Q96FN4 548 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 PGLYRP3Q96LB9 341 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 KCNS3Q9BQ31 491 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 C7orf50Q9BRJ6 194 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 RTN4RQ9BZR6 473 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 OR2B2Q9GZK3 357 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 SLC22A4Q9H015 551 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 C1orf198Q9H425 327 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ZCCHC4Q9H5U6 513 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 ISG20L2Q9H9L3 353 aaKnown RBP5.69□□□□□ -1.5
SF3A3-208ENST00000489537 SLC17A5Q9NRA2 495 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 PARPBPQ9NWS1 579 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 EMC3Q9P0I2 261 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 COPZ2Q9P299 210 aa5.69□□□□□ -1.5
SF3A3-208ENST00000489537 PLEKHB1Q9UF11 243 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms