RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 CDAP32320 146 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 CD79BP40259 229 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 GUCA1AP43080 201 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 CHN2P52757 468 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF91Q05481 1191 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 C10orf128Q5T292 105 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 SFRP5Q5T4F7 317 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 OTPQ5XKR4 325 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 STAC2Q6ZMT1 411 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF511Q8NB15 262 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 HTRA1Q92743 480 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 KISS1RQ969F8 398 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 RNFT2Q96EX2 444 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 FOXB1Q99853 325 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 VCX3AQ9NNX9 186 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 SCN3BQ9NY72 215 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 A0A096LPE4 126 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 SMIM31A0A1B0GVY4 71 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 A0A1W2PPZ6 126 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 CCDC182A6NF36 153 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 WIPF3A6NGB9 483 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 KHDRBS3O75525 346 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 MRPL3P09001 348 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 RNF224P0DH78 156 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 B4GALT1P15291 398 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 COX5AP20674 150 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 IL32P24001 234 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ATP6V1E1P36543 226 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 GLO1Q04760 184 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 SHFQ7M4L6 423 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 OR51G2Q8NGK0 314 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 SGCDQ92629 289 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 RACGAP1Q9H0H5 632 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 WARS2Q9UGM6 360 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 MOKQ9UQ07 419 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 MYRFQ9Y2G1 1151 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 HCFC1P51610 2035 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 TVP23AA6NH52 213 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 MPZL1O95297 269 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 CCDC159P0C7I6 412 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 EEF1B2P24534 225 aaKnown RBP12.5□□□□□ -0.41
CLDN11-209ENST00000489485 CSNK2BP67870 215 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 SGCAQ16586 387 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 RBM48Q5RL73 367 aaKnown RBP12.5□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF813Q6ZN06 617 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 AHSA2Q719I0 299 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 BHLHA15Q7RTS1 189 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-209ENST00000489485 GLB1L2Q8IW92 636 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 OR4F15Q8NGB8 312 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-209ENST00000489485 GGHQ92820 318 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 RNASE6Q93091 150 aaKnown RBP12.5□□□□□ -0.41
CLDN11-209ENST00000489485 HDHD5Q9BXW7 423 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 PLCXD1Q9NUJ7 323 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 PAK1IP1Q9NWT1 392 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-209ENST00000489485 PSORS1C1Q9UIG5 152 aa12.5□□□□□ -0.41
CLDN11-209ENST00000489485 C16orf97H3BN30 126 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 PSMB1P20618 241 aaKnown RBP12.49□□□□□ -0.41
CLDN11-209ENST00000489485 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
CLDN11-209ENST00000489485 LAP3P28838 519 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 UGT2B10P36537 528 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 PIGFQ07326 219 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 STK11Q15831 433 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 GABRA6Q16445 453 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 MEP1BQ16820 701 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 OR7E24Q6IFN5 339 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 LRRC18Q8N456 261 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 OR1K1Q8NGR3 316 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 LGALS12Q96DT0 336 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 WDR76Q9H967 626 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 TMEM38BQ9NVV0 291 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 TPRKBQ9Y3C4 175 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 UGT2A1Q9Y4X1 527 aa12.49□□□□□ -0.41
CLDN11-209ENST00000489485 SELENOFO60613 162 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 TNFAIP8O95379 198 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 TFP02787 698 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 HOXC12P31275 282 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 NAA10P41227 235 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SLC15A1P46059 708 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 CAPZA2P47755 286 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SLC35A2P78381 396 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 MVKQ03426 396 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 ST3GAL4Q11206 333 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 LCN1P1Q5VSP4 162 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 ANKRD16Q6P6B7 361 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
CLDN11-209ENST00000489485 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
CLDN11-209ENST00000489485 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms