RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 PABPC1L2AQ5JQF8 200 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 OR2T5Q6IEZ7 315 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 PGBD2Q6P3X8 592 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 ADCK1Q86TW2 530 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 JAZF1Q86VZ6 243 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 ZNF584Q8IVC4 421 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 ALDH16A1Q8IZ83 802 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 OR2T29Q8NH02 315 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 NABP1Q96AH0 204 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 SAMD8Q96LT4 415 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 GPX7Q96SL4 187 aaPredicted RBP11.57□□□□□ -0.56
CCL28-202ENST00000489442 RHNO1Q9BSD3 238 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 DLL4Q9NR61 685 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 SLC7A8Q9UHI5 535 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 FBXO9Q9UK97 447 aaPredicted RBP11.57□□□□□ -0.56
CCL28-202ENST00000489442 SAMHD1Q9Y3Z3 626 aaKnown RBP11.57□□□□□ -0.56
CCL28-202ENST00000489442 U3KQV3 271 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 AQP12BA6NM10 295 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 FAM171A2A8MVW0 826 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 GNGT2O14610 69 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 ACOT8O14734 319 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 CST1P01037 141 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 ERCC1P07992 297 aaPredicted RBP11.56□□□□□ -0.56
CCL28-202ENST00000489442 CST2P09228 141 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 MMP7P09237 267 aaPredicted RBP11.56□□□□□ -0.56
CCL28-202ENST00000489442 CCL2P13500 99 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 ZNF32P17041 273 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 APEX1P27695 318 aaKnown RBP11.56□□□□□ -0.56
CCL28-202ENST00000489442 GLRXP35754 106 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 GSSP48637 474 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 CENPAP49450 140 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 EFNA4P52798 201 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 FXYD6P3P58550 94 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 PPP1R8Q12972 351 aaKnown RBP11.56□□□□□ -0.56
CCL28-202ENST00000489442 TNK1Q13470 666 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 FLOT2Q14254 428 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 EFNB3Q15768 340 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 BIVMQ86UB2 503 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 AQP12AQ8IXF9 295 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
CCL28-202ENST00000489442 SVOPLQ8N434 492 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 OR9Q2Q8NGE9 314 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 SLC7A6OSQ96CW6 309 aaPredicted RBP11.56□□□□□ -0.56
CCL28-202ENST00000489442 CHID1Q9BWS9 393 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 SYT4Q9H2B2 425 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 OR51B6Q9H340 312 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 DYNLRB1Q9NP97 96 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 TIMM10BQ9Y5J6 103 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 FKBP7Q9Y680 259 aa11.56□□□□□ -0.56
CCL28-202ENST00000489442 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 CHD3Q12873 2000 aaKnown RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 DHRS12A0PJE2 317 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 IMPA2O14732 288 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 GPRIN2O60269 458 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 KHDRBS3O75525 346 aaKnown RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 ATP5HO75947 161 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 TXNDC12O95881 172 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 F12P00748 615 aaPredicted RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 RENP00797 406 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 LCKP06239 509 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 FAM157BP0CG42 384 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 APEHP13798 732 aaKnown RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 CTLA4P16410 223 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 STOMP27105 288 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 RAD52P43351 418 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 DSCR9P59020 149 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 SELENOVP59797 346 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 RPL13AP3Q6NVV1 102 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 LEG1Q6P5S2 330 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 CLEC9AQ6UXN8 241 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 AKR7LQ8NHP1 331 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 COX4I2Q96KJ9 171 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 FOXN4Q96NZ1 517 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 ZNF416Q9BWM5 594 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 RAB1BQ9H0U4 201 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 EMC7Q9NPA0 242 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 POLE4Q9NR33 117 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 VSX1Q9NZR4 365 aaPredicted RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 EIF3KQ9UBQ5 218 aaKnown RBP11.55□□□□□ -0.56
CCL28-202ENST00000489442 DUSP13Q9UII6 198 aa11.55□□□□□ -0.56
CCL28-202ENST00000489442 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 C5orf49A4QMS7 147 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 ARPC3O15145 178 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 GSC2O15499 205 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 IDH3BO43837 385 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 GASTP01350 101 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 CRABP1P29762 137 aa11.54□□□□□ -0.56
CCL28-202ENST00000489442 CDKN2AP42771 156 aaKnown RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 GDI2P50395 445 aaKnown RBP11.54□□□□□ -0.56
CCL28-202ENST00000489442 PSG4Q00888 419 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms