RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 C5orf49A4QMS7 147 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 ZSCAN5BA6NJL1 495 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 NPIPB13A6NJU9 1138 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 NPIPB4C9JG80 1138 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 SHOX2O60902 331 aaPredicted RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 UBOX5O94941 541 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 FSHBP01225 129 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 VIMP08670 466 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 GCH1P30793 250 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 LIMS1P48059 325 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 TAS2R41P59536 307 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 ERVK-25P63136 954 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 PSG4Q00888 419 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 CD47Q08722 323 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 HNRNPA0Q13151 305 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 PIN1Q13526 163 aaPredicted RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 LAPTM4AQ15012 233 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 SGCAQ16586 387 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 MBNL2Q5VZF2 373 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 SLC25A47Q6Q0C1 308 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 RFPL4BQ6ZWI9 263 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 ZDHHC22Q8N966 263 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 NANPQ8TBE9 248 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 KLF14Q8TD94 323 aaPredicted RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 LIPHQ8WWY8 451 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 CCL17Q92583 94 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 ATP6V1G3Q96LB4 118 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 OR2J1Q9GZK6 312 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 POLR2J2Q9GZM3 115 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 POLR2J3Q9H1A7 115 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 WNT5BQ9H1J7 359 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 STX18Q9P2W9 335 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 EIF3KQ9UBQ5 218 aaKnown RBP10.51□□□□□ -0.73
CPSF3-204ENST00000489403 OPN4Q9UHM6 478 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 RIMS3Q9UJD0 308 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
CPSF3-204ENST00000489403 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 ISPDA4D126 451 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 FBP2O00757 339 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 PIP5K1CO60331 668 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 OR5F1O95221 314 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 ADH4P08319 380 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 GATA3P23771 443 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 GDI2P50395 445 aaKnown RBP10.5□□□□□ -0.73
CPSF3-204ENST00000489403 LCN2P80188 198 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 TOP3AQ13472 1001 aaPredicted RBP10.5□□□□□ -0.73
CPSF3-204ENST00000489403 SPRNQ5BIV9 151 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 RABL3Q5HYI8 236 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 NANOGP8Q6NSW7 305 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 CALHM3Q86XJ0 350 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 BPIFB2Q8N4F0 458 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 CLDN22Q8N7P3 220 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 SGMS2Q8NHU3 365 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 GEMIN6Q8WXD5 167 aaKnown RBP10.5□□□□□ -0.73
CPSF3-204ENST00000489403 TXNIPQ9H3M7 391 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 C7orf69Q9H7B7 122 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 HIF3AQ9Y2N7 669 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
CPSF3-204ENST00000489403 ICMTO60725 284 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 PRSS23O95084 383 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 NGFP01138 241 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 NR2C1P13056 603 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 RBMXP38159 391 aaKnown RBP10.49□□□□□ -0.73
CPSF3-204ENST00000489403 OR1E2P47887 323 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 PPP1CBP62140 327 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 UBA52P62987 128 aaKnown RBP10.49□□□□□ -0.73
CPSF3-204ENST00000489403 SLC3A1Q07837 685 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 AWAT1Q58HT5 328 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 ALG10Q5BKT4 473 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 FAM27BQ5VT28 67 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 UNQ6126/PRO20091Q6UXV3 157 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 ABHD4Q8TB40 342 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 C22orf15Q8WYQ4 148 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 DVL3Q92997 716 aaPredicted RBP10.49□□□□□ -0.73
CPSF3-204ENST00000489403 OR2H1Q9GZK4 316 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 EGLN1Q9GZT9 426 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 NPHS2Q9NP85 383 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 CYSLTR2Q9NS75 346 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 INTS9Q9NV88 658 aaKnown RBP10.49□□□□□ -0.73
CPSF3-204ENST00000489403 DCAF16Q9NXF7 216 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 UBAP1Q9NZ09 502 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
CPSF3-204ENST00000489403 KLHL21Q9UJP4 597 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 BAG5Q9UL15 447 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 MED31Q9Y3C7 131 aa10.49□□□□□ -0.73
CPSF3-204ENST00000489403 WNK2Q9Y3S1 2297 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 GMNCA6NCL1 334 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 H3BSA7 217 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 FXYD1O00168 92 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 IGHV2-70P01814 119 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 IGHMP01871 453 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 CD55P08174 381 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 CST2P09228 141 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 THRBP10828 461 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
CPSF3-204ENST00000489403 LAP3P28838 519 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 LIPAP38571 399 aa10.48□□□□□ -0.73
CPSF3-204ENST00000489403 RPL27P61353 136 aaKnown RBP10.48□□□□□ -0.73
CPSF3-204ENST00000489403 ENDOGQ14249 297 aaKnown RBP10.48□□□□□ -0.73
CPSF3-204ENST00000489403 TAF11Q15544 211 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms