RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 H3F3CQ6NXT2 135 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 LINC01465Q8N7H1 131 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 OR51A4Q8NGJ6 313 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 NKX6-2Q9C056 277 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM231Q9H6L2 316 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 SMCO4Q9NRQ5 59 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 HS3ST1O14792 307 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 AKR7A2O43488 359 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 FGF17O60258 216 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ETHE1O95571 254 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 CER1O95813 267 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 SRPXP78539 464 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF266Q14584 549 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 DCAF12Q5T6F0 453 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 SH2D5Q6ZV89 423 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 SYT13Q7L8C5 426 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 NLRC3Q7RTR2 1065 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 BCORP1Q8N888 145 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 SFT2D1Q8WV19 159 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 PATE1Q8WXA2 126 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 YIPF6Q96EC8 236 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 OPA3Q9H6K4 179 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 FAM155AB1AL88 458 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ALX3O95076 343 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ALOX5APP20292 161 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 HABP2Q14520 560 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-209ENST00000489180 OR2G3Q8NGZ4 309 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ORAI1Q96D31 301 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 MED30Q96HR3 178 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 LYRM4Q9HD34 91 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 GAB2Q9UQC2 676 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 OSGIN2Q9Y236 505 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 MMACHCQ9Y4U1 282 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
NPHP4-209ENST00000489180 PRAMEF25A6NGN4 478 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 SULT1C4O75897 302 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 CSF3P09919 207 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 SPNP16150 400 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 PDZD11Q5EBL8 140 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TOR2AQ5JU69 321 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 DHRS4L2Q6PKH6 230 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 GOT1L1Q8NHS2 421 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 SLC37A2Q8TED4 501 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 MYOTQ9UBF9 498 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TLCD2A6NGC4 264 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF814B7Z6K7 855 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 AARDQ4LEZ3 155 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ASTLQ6HA08 431 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 MUCL1Q96DR8 90 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 DUS3LQ96G46 650 aaKnown RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 SPACA5Q96QH8 159 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TGIF2Q9GZN2 237 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ERVMER34-1Q9H9K5 563 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ISG20L2Q9H9L3 353 aaKnown RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 MRPL22Q9NWU5 206 aaKnown RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 GIPP09681 153 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 AFMIDQ63HM1 303 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 OR51H1Q8NH63 302 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ST8SIA2Q92186 375 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 DUSP21Q9H596 190 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF346Q9UL40 294 aaKnown RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 C19orf53Q9UNZ5 99 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM11P17152 192 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 LAP3P28838 519 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 EDDM3BP56851 147 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM41BQ5BJD5 291 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM71Q6P5X7 295 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 RBMXL3Q8N7X1 1067 aaKnown RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 SAT2Q96F10 170 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-209ENST00000489180 SEMA4CQ9C0C4 833 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 CMC2Q9NRP2 79 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 GRPP07492 148 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 BAGE3Q86Y29 109 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 BAGE2Q86Y30 109 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 CMTM4Q8IZR5 234 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 GSX2Q9BZM3 304 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 ARV1Q9H2C2 271 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 CDCP1Q9H5V8 836 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 DUSP13Q9UII6 198 aa16.11■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM235A6NFC5 223 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM200CA6NKL6 621 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 GABRB1P18505 474 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 GRB2P62993 217 aaKnown RBP16.1■□□□□ 0.17
NPHP4-209ENST00000489180 EDDM3AQ14507 147 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM81Q6P7N7 255 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 USB1Q9BQ65 265 aaKnown RBP16.1■□□□□ 0.17
NPHP4-209ENST00000489180 DUSP22Q9NRW4 184 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 MT-ATP6P00846 226 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 ICAM2P13598 275 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 GRINAQ7Z429 371 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 PTOV1Q86YD1 416 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 LGI3Q8N145 548 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 GJC3Q8NFK1 279 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 TPPP3Q9BW30 176 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 LHX6Q9UPM6 363 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF587BE7ETH6 402 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 HPNP05981 417 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 GUSBP08236 651 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms