RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, human

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTDSP1-209	ENST00000488627	IFNGR2	P38484	337 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	NUDT6	P53370	316 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	TSPAN31	Q12999	210 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	UGT2A3	Q6UWM9	527 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ADGRG5	Q8IZF4	528 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SVOPL	Q8N434	492 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ZNF525	Q8N782	197 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	GNPDA2	Q8TDQ7	276 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	MRPL24	Q96A35	216 aa	Known RBP	13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	MRPL37	Q9BZE1	423 aa	Known RBP	13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	WNT5B	Q9H1J7	359 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SYT4	Q9H2B2	425 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	C1orf198	Q9H425	327 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	POLE4	Q9NR33	117 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	CMAHP	Q9Y471	501 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SPEF1	Q9Y4P9	236 aa		13.73	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ARFGEF3	Q5TH69	2177 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	LOC100509620	A0A075B734	347 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	IGHV4-30-2	A0A087WSY4	118 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SOCS2	O14508	198 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ARPC3	O15145	178 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	GYG2	O15488	501 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	PPP1R3D	O95685	299 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	PTH	P01270	115 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	GAST	P01350	101 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	MSR1	P21757	451 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	EVX1	P49640	407 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	PPOX	P50336	477 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	RPS6KA3	P51812	740 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	PLP2	Q04941	152 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	KRTAP1-1	Q07627	177 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	PPP1R8	Q12972	351 aa	Known RBP	13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	BNIP1	Q12981	228 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	FAM98B	Q52LJ0	330 aa	Known RBP	13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	OR2T5	Q6IEZ7	315 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	CLEC9A	Q6UXN8	241 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ZNF620	Q6ZNG0	422 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627		Q71RC1	249 aa	Predicted RBP	13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ADCK1	Q86TW2	530 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	LRP11	Q86VZ4	500 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	MAPK1IP1L	Q8NDC0	245 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	OR9Q2	Q8NGE9	314 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	OR2T29	Q8NH02	315 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	AKR7L	Q8NHP1	331 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	FANK1	Q8TC84	345 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	POP5	Q969H6	163 aa	Known RBP	13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	POM121L2	Q96KW2	1035 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SAMD8	Q96LT4	415 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ZNF416	Q9BWM5	594 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	OR2H1	Q9GZK4	316 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	KCNN2	Q9H2S1	579 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	CCNB1IP1	Q9NPC3	277 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SLC7A8	Q9UHI5	535 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	TIMM10B	Q9Y5J6	103 aa		13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.72	□□□□□ -0.21
CTDSP1-209	ENST00000488627	IQCM	A0A1B0GVH7	501 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627		A0A1W2PPL8	197 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	AQP12B	A6NM10	295 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	DCTN6	O00399	190 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SLC16A7	O60669	478 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	HEXA	P06865	529 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	RAP2A	P10114	183 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	PCSK6	P29122	969 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SLC6A6	P31641	620 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	RIPPLY3	P57055	190 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	DSCR9	P59020	149 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	GALK2	Q01415	458 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	HSF2	Q03933	536 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	TBC1D28	Q2M2D7	210 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	DNAL1	Q4LDG9	190 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	SYT9	Q86SS6	491 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	AQP12A	Q8IXF9	295 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	OR1J2	Q8NGS2	313 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	CANT1	Q8WVQ1	401 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	FOXN4	Q96NZ1	517 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	TSSK2	Q96PF2	358 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	ERMAP	Q96PL5	475 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	RHNO1	Q9BSD3	238 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	CHID1	Q9BWS9	393 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	NUAK2	Q9H093	628 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	CDH20	Q9HBT6	801 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	EMC7	Q9NPA0	242 aa		13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	MYEF2	Q9P2K5	600 aa	Known RBP	13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	FBXO9	Q9UK97	447 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	COA3	Q9Y2R0	106 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-209	ENST00000488627	FAM171A2	A8MVW0	826 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	KHDRBS3	O75525	346 aa	Known RBP	13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	MPZL1	O95297	269 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	FAM157B	P0CG42	384 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	HIST1H1C	P16403	213 aa	Known RBP	13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	STOM	P27105	288 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	GUCA1A	P43080	201 aa	Predicted RBP	13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	UCP2	P55851	309 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	ERVS71-1	P61550	626 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	RPS23	P62266	143 aa	Known RBP	13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	DBP	Q10586	325 aa	Predicted RBP	13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	OTP	Q5XKR4	325 aa		13.7	□□□□□ -0.22
CTDSP1-209	ENST00000488627	CLEC2A	Q6UVW9	174 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms