RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 COPS3Q9UNS2 423 aa13.33□□□□□ -0.28
CTNS-206ENST00000488623 EXOSC1Q9Y3B2 195 aaKnown RBP13.33□□□□□ -0.28
CTNS-206ENST00000488623 EMC9Q9Y3B6 208 aa13.33□□□□□ -0.28
CTNS-206ENST00000488623 A0A1W2PQL4 384 aaPredicted RBP13.32□□□□□ -0.28
CTNS-206ENST00000488623 DAPL1A0PJW8 107 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 TNFSF13O75888 250 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 KRT33AO76009 404 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 CLPTM1O96005 669 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 CGAP01215 116 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 IL2RAP01589 272 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 HRGP04196 525 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 TFAP2AP05549 437 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 CRHP06850 196 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 TMIGD3P0DMS9 266 aaPredicted RBP13.32□□□□□ -0.28
CTNS-206ENST00000488623 ENTPD1P49961 510 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 ZNF84P51523 738 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 PER3P56645 1201 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 TLE1Q04724 770 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 PMPCAQ10713 525 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 SGCAQ16586 387 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 XAF1Q6GPH4 301 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 VWA1Q6PCB0 445 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 TFAP2EQ6VUC0 442 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 SSX6Q7RTT6 188 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 CDC20BQ86Y33 519 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 NANOGP1Q8N7R0 232 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 OR6K3Q8NGY3 331 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 OR6N2Q8NGY6 317 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 NABP1Q96AH0 204 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 STARD4Q96DR4 205 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 ALKBH3Q96Q83 286 aaPredicted RBP13.32□□□□□ -0.28
CTNS-206ENST00000488623 EMC7Q9NPA0 242 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 ACOT13Q9NPJ3 140 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 POLE4Q9NR33 117 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 PLSCR4Q9NRQ2 329 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 ERVK13-1Q9NX77 482 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 UPB1Q9UBR1 384 aa13.32□□□□□ -0.28
CTNS-206ENST00000488623 PTHP01270 115 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 ZNF823P16415 610 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 JUNBP17275 347 aaPredicted RBP13.31□□□□□ -0.28
CTNS-206ENST00000488623 CD79BP40259 229 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 ADAM8P78325 824 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 MRPS34P82930 218 aaKnown RBP13.31□□□□□ -0.28
CTNS-206ENST00000488623 FAPQ12884 760 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 BLMHQ13867 455 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 DOC2BQ14184 412 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 STK11Q15831 433 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 PCK2Q16822 640 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 TEX30Q5JUR7 227 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 DPY19L4Q7Z388 723 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 UBE2J2Q8N2K1 259 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 SVOPQ8N4V2 548 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 RFLNBQ8N5W9 214 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 ZFP3Q96NJ6 502 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 INPP5EQ9NRR6 644 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 TMEM38BQ9NVV0 291 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 SH3BGRL2Q9UJC5 107 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 KLHDC2Q9Y2U9 406 aa13.31□□□□□ -0.28
CTNS-206ENST00000488623 NCOA6Q14686 2063 aaPredicted RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 INTS1Q8N201 2190 aaKnown RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 ZNF587BE7ETH6 402 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 ZNF670-ZNF695F2Z2N8 137 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 LCKP06239 509 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 SPARCP09486 303 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 MYL12AP19105 171 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 ALOX5APP20292 161 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 CTSSP25774 331 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 ALDH3B2P48448 385 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 ARF1P84077 181 aaKnown RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 GALEQ14376 348 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 TBCEQ15813 527 aaPredicted RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 NEDD8Q15843 81 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 EIF2S3LQ2VIR3 472 aaKnown RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 OR2G6Q5TZ20 316 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 NCCRP1Q6ZVX7 275 aaPredicted RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 ZNF610Q8N9Z0 462 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 OTOSQ8NHW6 89 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 OR5M11Q96RB7 305 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 FOXB1Q99853 325 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 NELFAQ9H3P2 528 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 CHCHD3Q9NX63 227 aaKnown RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 KCNG2Q9UJ96 466 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 ERGIC3Q9Y282 383 aa13.3□□□□□ -0.28
CTNS-206ENST00000488623 LSM2Q9Y333 95 aaKnown RBP13.3□□□□□ -0.28
CTNS-206ENST00000488623 SPENQ96T58 3664 aaKnown RBP13.29□□□□□ -0.28
CTNS-206ENST00000488623 TRGV8A0A0C4DH27 118 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 A0A0G2JNJ9 132 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 ZNF99A8MXY4 864 aaPredicted RBP13.29□□□□□ -0.28
CTNS-206ENST00000488623 PRR32B1ATL7 298 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 MAGEB4O15481 346 aaPredicted RBP13.29□□□□□ -0.28
CTNS-206ENST00000488623 SEC14L2O76054 403 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 INMTO95050 263 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 NPR2P20594 1047 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 MSR1P21757 451 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 GUCA1AP43080 201 aaPredicted RBP13.29□□□□□ -0.28
CTNS-206ENST00000488623 LSM6P62312 80 aaKnown RBP13.29□□□□□ -0.28
CTNS-206ENST00000488623 ACTC1P68032 377 aa13.29□□□□□ -0.28
CTNS-206ENST00000488623 ACTA1P68133 377 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms