RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PDP1Q9P0J1 537 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-207ENST00000488591 BAIAP2Q9UQB8 552 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CD8AP01732 235 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 HIST1H1CP16403 213 aaKnown RBP13.05□□□□□ -0.32
CXCL12-207ENST00000488591 CTLA4P16410 223 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 LAP3P28838 519 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 PTH2RP49190 550 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 CENPAP49450 140 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 DAG1Q14118 895 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 ETFDHQ16134 617 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 SHEQ5VZ18 495 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 LEG1Q6P5S2 330 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 VHLLQ6RSH7 139 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 CD300LDQ6UXZ3 194 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 SYT9Q86SS6 491 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 GLB1L2Q8IW92 636 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 ALDH16A1Q8IZ83 802 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 SLC30A7Q8NEW0 376 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 OR4K13Q8NH42 304 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 NMNAT3Q96T66 252 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 TSSK6Q9BXA6 273 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 CA10Q9NS85 328 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF701Q9NV72 531 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-207ENST00000488591 TIMM10BQ9Y5J6 103 aa13.05□□□□□ -0.32
CXCL12-207ENST00000488591 OVOL3O00110 214 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 TIPRLO75663 272 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 MMP7P09237 267 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF35P13682 527 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 ANXA8P13928 327 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF32P17041 273 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 NR4A1P22736 598 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 APLNRP35414 380 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 SERPINF1P36955 418 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 ATP5J2P56134 94 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 HGFACQ04756 655 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
CXCL12-207ENST00000488591 SNTB2Q13425 540 aaKnown RBP13.04□□□□□ -0.32
CXCL12-207ENST00000488591 TBC1D28Q2M2D7 210 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 PABPC1L2AQ5JQF8 200 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 SLC35F1Q5T1Q4 408 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 KRT80Q6KB66 452 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 OR52E2Q8NGJ4 325 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 FBXO17Q96EF6 278 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 NRBF2Q96F24 287 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 NIPSNAP1Q9BPW8 284 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF442Q9H7R0 627 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 SRA1Q9HD15 236 aaKnown RBP13.04□□□□□ -0.32
CXCL12-207ENST00000488591 ARMC1Q9NVT9 282 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 COA3Q9Y2R0 106 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-207ENST00000488591 AP4S1Q9Y587 144 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
CXCL12-207ENST00000488591 H3BN98 237 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 SOX14O95416 240 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 FCGR1AP12314 374 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 CDKN1AP38936 164 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 RPS23P62266 143 aaKnown RBP13.03□□□□□ -0.32
CXCL12-207ENST00000488591 CCNIQ14094 377 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 Q5PR19 223 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 PRSS57Q6UWY2 283 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 TMEM179BQ7Z7N9 219 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF584Q8IVC4 421 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 OR2T33Q8NG76 320 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 TEX47Q8TBZ9 253 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 DUS3LQ96G46 650 aaKnown RBP13.03□□□□□ -0.32
CXCL12-207ENST00000488591 BDH2Q9BUT1 245 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF416Q9BWM5 594 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 PLA2G12AQ9BZM1 189 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
CXCL12-207ENST00000488591 PLCE1Q9P212 2302 aa13.03□□□□□ -0.32
CXCL12-207ENST00000488591 B9A039 149 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 BHLHE40O14503 412 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 OR4A8P0C604 315 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 FASP25445 335 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 STOMP27105 288 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 THBS4P35443 961 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 LSM6P62312 80 aaKnown RBP13.02□□□□□ -0.33
CXCL12-207ENST00000488591 SNRPD2P62316 118 aaKnown RBP13.02□□□□□ -0.33
CXCL12-207ENST00000488591 ADAM8P78325 824 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 PSG4Q00888 419 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 GLO1Q04760 184 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 SCRN3Q0VDG4 424 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 RAB35Q15286 201 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 ADIPOQQ15848 244 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 SHQ1Q6PI26 577 aaKnown RBP13.02□□□□□ -0.33
CXCL12-207ENST00000488591 UNQ6126/PRO20091Q6UXV3 157 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 TGIF2LYQ8IUE0 185 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 C10orf67Q8IYJ2 551 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 LNX2Q8N448 690 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 ATG16L2Q8NAA4 619 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 SDR9C7Q8NEX9 313 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 OR8D4Q8NGM9 314 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 UTP4Q969X6 686 aaKnown RBP13.02□□□□□ -0.33
CXCL12-207ENST00000488591 FOXN4Q96NZ1 517 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 CACNG6Q9BXT2 260 aa13.02□□□□□ -0.33
CXCL12-207ENST00000488591 OR2H1Q9GZK4 316 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms