RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 DOK3Q7L591 496 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 FAM71CQ8NEG0 241 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 DMBX1Q8NFW5 382 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 UTP23Q9BRU9 249 aaKnown RBP13.46□□□□□ -0.25
EPHB4-206ENST00000487222 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 PCDHGA5Q9Y5G8 931 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 F5P12259 2224 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 A0A1B0GTL3 188 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 TPPPO94811 219 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 CD22P20273 847 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 SNCAP37840 140 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 TPMTP51580 245 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 ADPRHP54922 357 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 DCAF12Q5T6F0 453 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 LIPHQ8WWY8 451 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
EPHB4-206ENST00000487222 LOC107986453A0A1B0GWG9 222 aa13.46□□□□□ -0.26
EPHB4-206ENST00000487222 M0R082 166 aa13.46□□□□□ -0.26
EPHB4-206ENST00000487222 ALOX12BO75342 701 aa13.46□□□□□ -0.26
EPHB4-206ENST00000487222 MED18Q9BUE0 208 aa13.46□□□□□ -0.26
EPHB4-206ENST00000487222 FGF20Q9NP95 211 aaPredicted RBP13.46□□□□□ -0.26
EPHB4-206ENST00000487222 SCN7AQ01118 1682 aa13.46□□□□□ -0.26
EPHB4-206ENST00000487222 OR2F2O95006 317 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 CLDN1O95832 211 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 RACK1P63244 317 aaKnown RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 OR2F1Q13607 317 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 COL22A1Q8NFW1 1626 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 OR4N2Q8NGD1 307 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 UBL7Q96S82 380 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 B3GALT5Q9Y2C3 310 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 HSPB6O14558 160 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 ETHE1O95571 254 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 CSF3P09919 207 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 APEHP13798 732 aaKnown RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 GABRB1P18505 474 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 KIRREL1Q96J84 757 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 SEMA4CQ9C0C4 833 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 SLC6A17Q9H1V8 727 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 EVPLQ92817 2033 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 H7C1Q1 480 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 ELSPBP1Q96BH3 223 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 MUCL1Q96DR8 90 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 SMIM19Q96E16 107 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 SEH1LQ96EE3 360 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 TAS2R4Q9NYW5 299 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 CHRNA9Q9UGM1 479 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 PIGLQ9Y2B2 252 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 G3V3Y1 287 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 EPHA2P29317 976 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 DOC2BQ14184 412 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 PTCRAQ6ISU1 281 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 PARM1Q6UWI2 310 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 S100A7AQ86SG5 101 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 ARIH2OSQ8N7S6 290 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 GOT1L1Q8NHS2 421 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-206ENST00000487222 EDAQ92838 391 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 WWTR1Q9GZV5 400 aa13.45□□□□□ -0.26
EPHB4-206ENST00000487222 ZNF749O43361 778 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 DFFBO76075 338 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CD1EP15812 388 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 THBS3P49746 956 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CLDN20P56880 219 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 HNF4GQ14541 408 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 LFNGQ8NES3 379 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 ZNF385DQ9H6B1 395 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 BCO1Q9HAY6 547 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 TAS2R5Q9NYW4 299 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 SIT1Q9Y3P8 196 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 AKR7A3O95154 331 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CXCL10P02778 98 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 SLC2A1P11166 492 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 FOLR1P15328 257 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CD27P26842 260 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 HCCSP53701 268 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 OR10K2Q6IF99 312 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 ZNF808Q8N4W9 903 aaPredicted RBP13.44□□□□□ -0.26
EPHB4-206ENST00000487222 BCORP1Q8N888 145 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 OR51A4Q8NGJ6 313 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 IFITM5A6NNB3 132 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 PRRT4C9JH25 899 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 ZNF587BE7ETH6 402 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CCSO14618 274 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CYB5BO43169 146 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 DEFA6Q01524 100 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 RHOUQ7L0Q8 258 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 KANSL1Q7Z3B3 1105 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 GABRG1Q8N1C3 465 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 OR6K3Q8NGY3 331 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 MYEOVQ96EZ4 313 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 CROCCQ5TZA2 2017 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 A0A087WV62 115 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 HSPB2A8KAH6 182 aa13.44□□□□□ -0.26
EPHB4-206ENST00000487222 PRR35P0CG20 571 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms