RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 AK1P00568 194 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 GUSBP08236 651 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 LINC00032P0C843 101 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 NPIPA8P0DM63 369 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 UBL4AP11441 157 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 PGCP20142 388 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 HNF1AP20823 631 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 EFNA1P20827 205 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 PAX7P23759 505 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 IGFBP5P24593 272 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 HPCAL1P37235 193 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 APOBEC1P41238 236 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 MAGEA8P43361 318 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 CCR4P51679 360 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 RPL38P63173 70 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 H3F3AP84243 136 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 TGFBR3Q03167 851 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 MERTKQ12866 999 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 SKP2Q13309 424 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 GPR68Q15743 365 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF141Q15928 474 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 NDUFAF6Q330K2 333 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ARHGAP11BQ3KRB8 267 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 UGT3A2Q3SY77 523 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 SYT14P1Q58G82 188 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 FAM120AOSQ5T036 256 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 PDZK1Q5T2W1 519 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 LIPNQ5VXI9 398 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 FAM166AQ6J272 317 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 BHLHB9Q6PI77 547 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 B3GLCTQ6Y288 498 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 EIF3MQ7L2H7 374 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 UBE2J2Q8N2K1 259 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 C17orf78Q8N4C9 275 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 TMCO5AQ8N6Q1 288 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ARIH2OSQ8N7S6 290 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF614Q8N883 585 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 WDR31Q8NA23 367 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 NOA1Q8NC60 698 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF540Q8NDQ6 660 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 MNS1Q8NEH6 495 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 OR7A2PQ8NGA2 310 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 OR52N5Q8NH56 324 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 CLHC1Q8NHS4 586 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 PIGXQ8TBF5 258 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 SFXN5Q8TD22 340 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ZHX1-C8orf76Q96EF9 292 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 KTI12Q96EK9 354 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 OTUB1Q96FW1 271 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 C3orf30Q96M34 536 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 OR7D2Q96RA2 312 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 THUMPD3Q9BV44 507 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 CSTL1Q9H114 145 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 MYOZ1Q9NP98 299 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ATAD3AQ9NVI7 634 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF224Q9NZL3 707 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 TBK1Q9UHD2 729 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 TRAPPC4Q9Y296 219 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 AMDHD2Q9Y303 409 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 NOSIPQ9Y314 301 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 HDGFL3Q9Y3E1 203 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 DNAJC15Q9Y5T4 150 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 SPIN1Q9Y657 262 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 KCNE3Q9Y6H6 103 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 MGAM2Q2M2H8 2515 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 TENM1Q9UKZ4 2725 aa3.4□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A1W2PR80 420 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 FAM172BPA6NC97 362 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 M0R1B8 84 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 COPEO14579 308 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 CFLARO15519 480 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF208O43345 1280 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 EIF1BO60739 113 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 UGT2B17O75795 530 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 C6orf47O95873 294 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 AGR2O95994 175 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 CSTAP01040 98 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 TGFAP01135 160 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 IGHV3-9P01782 118 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 UBTFL6P0CB48 400 aaPredicted RBP3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 TFPIP10646 304 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 HLA-DOBP13765 273 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF23P17027 643 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 PRPS1L1P21108 318 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 PGM1P36871 562 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 HTR3AP46098 478 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 PRPS1P60891 318 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 HBA1P69905 142 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 SLC35A1P78382 337 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 SPOCK1Q08629 439 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 GGTLC2Q14390 218 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 C6orf136Q5SQH8 315 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 GRINAQ7Z429 371 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 C6orf120Q7Z4R8 191 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 MYPOPQ86VE0 399 aaPredicted RBP3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 C10orf107Q8IVU9 208 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 RIMKLAQ8IXN7 391 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 IFT20Q8IY31 132 aa3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 C17orf53Q8N3J3 647 aaPredicted RBP3.4□□□□□ -1.87
SNRNP40-205ENST00000486941 CCDC63Q8NA47 563 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms