RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SYT4Q9H2B2 425 aa11.4□□□□□ -0.58
SF1-216ENST00000486867 C1orf198Q9H425 327 aa11.4□□□□□ -0.58
SF1-216ENST00000486867 BAIAP2Q9UQB8 552 aa11.4□□□□□ -0.58
SF1-216ENST00000486867 TEP1Q99973 2627 aaKnown RBP11.39□□□□□ -0.59
SF1-216ENST00000486867 DCTN6O00399 190 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 ICMTO60725 284 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 KHDRBS3O75525 346 aaKnown RBP11.39□□□□□ -0.59
SF1-216ENST00000486867 TIPRLO75663 272 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 RAB36O95755 333 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 SCG5P05408 212 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 PATE4P0C8F1 98 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 ANXA8P13928 327 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 MSR1P21757 451 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 NR4A1P22736 598 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 LAP3P28838 519 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 CRABP1P29762 137 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 APOBEC3AP31941 199 aaPredicted RBP11.39□□□□□ -0.59
SF1-216ENST00000486867 CAPZA2P47755 286 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 ACTR3P61158 418 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 LSM6P62312 80 aaKnown RBP11.39□□□□□ -0.59
SF1-216ENST00000486867 PIGFQ07326 219 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 NPRL3Q12980 569 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 RAB39AQ14964 217 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 AGAP6Q5VW22 663 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 FAHD1Q6P587 224 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 GLB1L2Q8IW92 636 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 DNAJC9Q8WXX5 260 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 GTPBP3Q969Y2 492 aaKnown RBP11.39□□□□□ -0.59
SF1-216ENST00000486867 KCNS3Q9BQ31 491 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 IFT27Q9BW83 186 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 NUAK2Q9H093 628 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 CXorf56Q9H5V9 222 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 CA10Q9NS85 328 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 CBLN4Q9NTU7 201 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 AP4S1Q9Y587 144 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 FKBP7Q9Y680 259 aa11.39□□□□□ -0.59
SF1-216ENST00000486867 OR6C68A6NDL8 312 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 SLC16A7O60669 478 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 SMPD2O60906 423 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 CIB2O75838 187 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 PTHP01270 115 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 GAAP10253 952 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 FCGR1AP12314 374 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 ZNF32P17041 273 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 PCSK6P29122 969 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 PTH2RP49190 550 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 ERFP50548 548 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 PCBD1P61457 104 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 EFNB3Q15768 340 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 ADIPOQQ15848 244 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 SGCAQ16586 387 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 SWI5Q1ZZU3 235 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 MST1LQ2TV78 715 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 HS3ST5Q8IZT8 346 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 OR6V1Q8N148 313 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 MUC15Q8N387 334 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
SF1-216ENST00000486867 OR4Q3Q8NH05 313 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 NMNAT3Q96T66 252 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 ZNF416Q9BWM5 594 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 NMNAT2Q9BZQ4 307 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 PDP1Q9P0J1 537 aaPredicted RBP11.38□□□□□ -0.59
SF1-216ENST00000486867 POU2F3Q9UKI9 436 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 B9D1Q9UPM9 204 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 LAMP3Q9UQV4 416 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 CR1P17927 2039 aa11.38□□□□□ -0.59
SF1-216ENST00000486867 ZANQ9Y493 2812 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 C12orf71A8MTZ7 269 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 H7C417 338 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 GNGT2O14610 69 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 E2F6O75461 281 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 RENP00797 406 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 IGFBP1P08833 259 aaPredicted RBP11.37□□□□□ -0.59
SF1-216ENST00000486867 COX5BP10606 129 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 GUCA1AP43080 201 aaPredicted RBP11.37□□□□□ -0.59
SF1-216ENST00000486867 FABP6P51161 128 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 HIST1H3AP68431 136 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 ADAM8P78325 824 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 PSG4Q00888 419 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.37□□□□□ -0.59
SF1-216ENST00000486867 PABPC1L2AQ5JQF8 200 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 CLEC12AQ5QGZ9 265 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 HIST2H3PS2Q5TEC6 136 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 SHEQ5VZ18 495 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 LEG1Q6P5S2 330 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 DNM1P34Q6PK57 102 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 HIST2H3AQ71DI3 136 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 JAZF1Q86VZ6 243 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 SLC30A7Q8NEW0 376 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 SLC26A10Q8NG04 563 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 OR2T33Q8NG76 320 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 OR4K13Q8NH42 304 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 OR5K1Q8NHB7 308 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 POM121L2Q96KW2 1035 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 TSSK2Q96PF2 358 aa11.37□□□□□ -0.59
SF1-216ENST00000486867 RBM4Q9BWF3 364 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms